RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 IGKV1-12A0A0C4DH73 117 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 SPAARA0A1B0GVQ0 90 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 GOLGA6L10A6NI86 522 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 E7EQ34 232 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 GOLGA8MH3BSY2 632 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 TNFSF15O95150 251 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 SOD1P00441 154 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 IGKV1D-12P01611 117 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 SERPINB1P30740 379 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 CAPZBP47756 277 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 UBE2IP63279 158 aaKnown RBP2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 CTAGE3PQ8IX95 158 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 RIBC1Q8N443 379 aaPredicted RBP2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 LFNGQ8NES3 379 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR4E2Q8NGC2 313 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR52E4Q8NGH9 312 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR10D4PQ8NGN7 298 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 STOML3Q8TAV4 291 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 SLC37A2Q8TED4 501 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 DRC3Q9H069 523 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 MRPL40Q9NQ50 206 aaKnown RBP2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 UBQLN4Q9NRR5 601 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 FIS1Q9Y3D6 152 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 UNC13CQ8NB66 2214 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 NF1P21359 2839 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 CHD5Q8TDI0 1954 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 AHCTF1Q8WYP5 2266 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 PLXND1Q9Y4D7 1925 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 IGF2RP11717 2491 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 A0A0J9YY10 115 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 EXOC1LA0A1B0GW35 172 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 SDHAF1A6NFY7 115 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 A8MWP6 167 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 ZNF73O43830 326 aaPredicted RBP2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 SMIM24O75264 130 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR2B3O76000 313 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 PET100P0DJ07 73 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 AGTR1P30556 359 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 CCR7P32248 378 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 DCDP81605 110 aaKnown RBP2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 C1DQ13901 141 aaKnown RBP2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 DOLPP1Q86YN1 238 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 MSRB3Q8IXL7 192 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 FAM9CQ8IZT9 166 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR5L1Q8NGL2 311 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 GPR119Q8TDV5 335 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 ZCCHC13Q8WW36 166 aaKnown RBP2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 MRPL57Q9BQC6 102 aaKnown RBP2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 AIF1LQ9BQI0 150 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 ULBP3Q9BZM4 244 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 DERL2Q9GZP9 239 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 METTL9Q9H1A3 318 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 TCEAL2Q9H3H9 227 aaPredicted RBP2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 FAM96AQ9H5X1 160 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 GLS2Q9UI32 602 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 LINC00527Q9UJ94 153 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 PYCARDQ9ULZ3 195 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 PSMD13Q9UNM6 376 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 LAMA1P25391 3075 aa2.46□□□□□ -2.02
CKS1BP1-201ENST00000555221 KIAA1549LQ6ZVL6 1849 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 CREBBPQ92793 2442 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 FAM159BA6NKW6 160 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 ZNF878C9JN71 531 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 PSMD12O00232 456 aaPredicted RBP2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR1I1O60431 355 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 STK16O75716 305 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 ORM1P02763 201 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 SERPINA6P08185 405 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR4A8P0C604 315 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 ALDH3A1P30838 453 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 CRATP43155 626 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 PSMB3P49720 205 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 PSPHP78330 225 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 UAP1Q16222 522 aaPredicted RBP2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 CCDC153Q494R4 210 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 TRMT12Q53H54 448 aaKnown RBP2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 XKRXQ6PP77 449 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 ZFAND2AQ8N6M9 145 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 NATD1Q8N6N6 113 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR10P1Q8NGE3 313 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 CCL4L1Q8NHW4 92 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 EEF1AKMT1Q8WVE0 214 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 C20orf166-AS1Q96NR2 134 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 GPR22Q99680 433 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 SELENOSQ9BQE4 189 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 EFCAB11Q9BUY7 163 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 WDR54Q9H977 334 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 C14orf105Q9NVL8 296 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 EURLQ9NYK6 297 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 OPTCQ9UBM4 332 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 KMT2EQ8IZD2 1858 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 COL4A2P08572 1712 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 NOTCH1P46531 2555 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 LAMA5O15230 3695 aa2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
CKS1BP1-201ENST00000555221 APC2O95996 2303 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 A0A1B0GX78 115 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 DAPL1A0PJW8 107 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR51F1A6NGY5 319 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms