RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 P2RY1P47900 373 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 RPL8P62917 257 aaKnown RBP8.58□□□□□ -1.04
SHMT2-218ENST00000555213 SSBP2P81877 361 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-218ENST00000555213 NDPQ00604 133 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 PJVKQ0ZLH3 352 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 OPCMLQ14982 345 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 OR5AU1Q8NGC0 362 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 OR52E5Q8NH55 327 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 SGMS2Q8NHU3 365 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 DCUN1D4Q92564 292 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 SMIM8Q96KF7 97 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 ZFP57Q9NU63 452 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 LINC00527Q9UJ94 153 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 TNCP24821 2201 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 A0A0D9SG52 128 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 IGSF23A1L1A6 192 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 LINC01548A6NM66 108 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 C15orf61A6NNL5 157 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 L7N2F9 121 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 SSSCA1O60232 199 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 OPN1MWP04001 364 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 OPN1MW2P0DN77 364 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 OPN1MW3P0DN78 364 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 RPL12P30050 165 aaKnown RBP8.57□□□□□ -1.04
SHMT2-218ENST00000555213 S100A11P31949 105 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 CRIP2P52943 208 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-218ENST00000555213 OR2B8PP59922 312 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 HSPE1P61604 102 aaKnown RBP8.57□□□□□ -1.04
SHMT2-218ENST00000555213 NHLH2Q02577 135 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 OR2F1Q13607 317 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 ZNF345Q14585 488 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 KHDC1LQ5JSQ8 128 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 TEX38Q6PEX7 206 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 UNQ5815/PRO19632Q6UWF5 114 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 HAPLN4Q86UW8 402 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 TMEM252Q8N6L7 170 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 TMEM170AQ8WVE7 144 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 SRSF12Q8WXF0 261 aaKnown RBP8.57□□□□□ -1.04
SHMT2-218ENST00000555213 TMEM68Q96MH6 324 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 CITED1Q99966 193 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 COMMD5Q9GZQ3 224 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 WFDC1Q9HC57 220 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 PRNDQ9UKY0 176 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 FOXA2Q9Y261 457 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-218ENST00000555213 WSB1Q9Y6I7 421 aa8.57□□□□□ -1.04
SHMT2-218ENST00000555213 FBN1P35555 2871 aaKnown RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 PMS2P5A8MQ11 134 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 WRBO00258 174 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 RBMXL2O75526 392 aaKnown RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 CFDP00746 253 aaPredicted RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 RPL27AP46776 148 aaKnown RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 AP2S1P53680 142 aaPredicted RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 TAS2R30P59541 319 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 SPCS3P61009 180 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 ARL16Q0P5N6 197 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 FOXE3Q13461 319 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 AKIRIN2Q53H80 203 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 SPINK9Q5DT21 86 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 ZNF329Q86UD4 541 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 MRPL41Q8IXM3 137 aaKnown RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 OR2C3Q8N628 320 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 OR4A16Q8NH70 328 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 RAB40CQ96S21 281 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 FAM103A1Q9BTL3 118 aaKnown RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 LYRM2Q9NU23 88 aaPredicted RBP8.56□□□□□ -1.04
SHMT2-218ENST00000555213 FKBP11Q9NYL4 201 aa8.56□□□□□ -1.04
SHMT2-218ENST00000555213 A0A1W2PN81 502 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 TCRBV4S1A1TA0A5B7 111 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 G3V318 75 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 M0QZ24 198 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 IGHG4P01861 327 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 ELANEP08246 267 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 PET100P0DJ07 73 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 CD28P10747 220 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 IAPPP10997 89 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 CHRNA7P36544 502 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 CFHR3Q02985 330 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 TMEM14EPQ6UXP3 125 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 INO80EQ8NBZ0 244 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-218ENST00000555213 LFNGQ8NES3 379 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 OR5B3Q8NH48 314 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 WIPF2Q8TF74 440 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-218ENST00000555213 OR4C12Q96R67 309 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 ARL6Q9H0F7 186 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 ZNF257Q9Y2Q1 563 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 FBXO7Q9Y3I1 522 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 OR51B2Q9Y5P1 312 aa8.55□□□□□ -1.04
SHMT2-218ENST00000555213 PLXNB1O43157 2135 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 PF4V1P10720 104 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 EWSR1Q01844 656 aaKnown RBP eCLIP8.54□□□□□ -1.04
SHMT2-218ENST00000555213 C10orf55Q5SWW7 151 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 HSD17B13Q7Z5P4 300 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-218ENST00000555213 NDUFA11Q86Y39 141 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 OR1L8Q8NGR8 309 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 DTD1Q8TEA8 209 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 CITED2Q99967 270 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-218ENST00000555213 SRSF8Q9BRL6 282 aaKnown RBP8.54□□□□□ -1.04
SHMT2-218ENST00000555213 ZNF355PQ9NSJ1 428 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms