RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 SELENOVP59797 346 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 SUMO1P63165 101 aaKnown RBP7.83□□□□□ -1.16
SYNE2-213ENST00000554805 CENPWQ5EE01 88 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 MRPL54Q6P161 138 aaKnown RBP7.83□□□□□ -1.16
SYNE2-213ENST00000554805 SIGLECL1Q8N7X8 197 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 OR5AU1Q8NGC0 362 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 RND1Q92730 232 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 CORO2AQ92828 525 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 EAF1Q96JC9 268 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-213ENST00000554805 NABP2Q9BQ15 211 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 SLC45A2Q9UMX9 530 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 HCFC1P51610 2035 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 FRMD6-AS1P0C7T7 363 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 PMCHP20382 165 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 KRTCAP3Q53RY4 240 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 C1orf194Q5T5A4 169 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 CCL13Q99616 98 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 RAB9BQ9NP90 201 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 SLC35D1Q9NTN3 355 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 TMEM106BQ9NUM4 274 aa7.83□□□□□ -1.16
SYNE2-213ENST00000554805 YLPM1P49750 1951 aaKnown RBP7.83□□□□□ -1.16
SYNE2-213ENST00000554805 KMT2EQ8IZD2 1858 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 A0A1B0GWJ7 208 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 FAM90A9PA6NNJ1 464 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 K7EN84 100 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 NUTF2P61970 127 aaKnown RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 DEFB109BQ30KR1 87 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 DUX4L9Q6RFH8 374 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 VAMP8Q9BV40 100 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 PRSS47A8MTI9 375 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 FTH1P19P0C7X4 201 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 ZNF25P17030 456 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 LOXL3P58215 753 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 RANP62826 216 aaKnown RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 PAFAH1B2P68402 229 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 MLANAQ16655 118 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 MSMPQ1L6U9 139 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 C1orf162Q8NEQ5 155 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 TECRQ9NZ01 308 aaKnown RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 IL19Q9UHD0 177 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 TMEM249Q2WGJ8 235 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 MBNL2Q5VZF2 373 aaKnown RBP7.82□□□□□ -1.16
SYNE2-213ENST00000554805 NHLRC2Q8NBF2 726 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 TMEM167BQ9NRX6 74 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 IDI2-AS1Q9NZ38 188 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 ZNRD1Q9P1U0 126 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 PRNDQ9UKY0 176 aa7.82□□□□□ -1.16
SYNE2-213ENST00000554805 F2Z2F3 143 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 AMTP48728 403 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 CASP6P55212 293 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 YPEL3P61236 119 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-213ENST00000554805 RTL8BQ17RB0 113 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 Q6ZWC4 215 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 TUBG2Q9NRH3 451 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 ZNF586Q9NXT0 402 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 IGHG3P01860 377 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 IRF2P14316 349 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 NTF3P20783 257 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 TAS2R45P59539 299 aa7.81□□□□□ -1.16
SYNE2-213ENST00000554805 TNFAIP6P98066 277 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-213ENST00000554805 ZNF71Q9NQZ8 489 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-213ENST00000554805 LSM4Q9Y4Z0 139 aaKnown RBP7.81□□□□□ -1.16
SYNE2-213ENST00000554805 KBTBD11-OT1A0A1B0GTJ5 212 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 F2RL2O00254 374 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 ZNF253O75346 499 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 IGHV3-48P01763 117 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 TMEM183BQ1AE95 376 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 TDRG1Q3Y452 100 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 CYB5R2Q6BCY4 276 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 FAM90A1Q86YD7 464 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 FAM216BQ8N7L0 139 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 STARD4Q96DR4 205 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 ADTRPQ96IZ2 230 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 RNF7Q9UBF6 113 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 TRGV8A0A0C4DH27 118 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 PRSS46E5RG02 174 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 CDKN1AP38936 164 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 REG1BP48304 166 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 LGALS4P56470 323 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 TMPRSS3P57727 454 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 ZNF124Q15973 351 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 C21orf62-AS1Q17RA5 79 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 ST6GALNAC3Q8NDV1 305 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 OR9G1Q8NH87 305 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 COMMD5Q9GZQ3 224 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 PLSCR4Q9NRQ2 329 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 WNK2Q9Y3S1 2297 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 C17orf58Q2M2W7 97 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 C1orf159Q96HA4 380 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 SLC35E1Q96K37 410 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 FOXA2Q9Y261 457 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-213ENST00000554805 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
SYNE2-213ENST00000554805 AHRRA9YTQ3 701 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 IGLV1-44P01699 117 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 UBE2L3P68036 154 aaKnown RBP7.79□□□□□ -1.16
SYNE2-213ENST00000554805 ASPHD1Q5U4P2 390 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 PRR27Q6MZM9 219 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 SSBP3Q9BWW4 388 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms