RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PTHP01270 115 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 IGKV1D-33P01593 117 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 IGKV1-33P01594 117 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 HLA-DQB1P01920 261 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GUSBP08236 651 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 STAG3L3P0CL85 134 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 CTLA4P16410 223 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 NFYBP25208 207 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 POLR2IP36954 125 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 MYCNOSP40205 109 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GUCA1AP43080 201 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PLTPP55058 493 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 DR1Q01658 176 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RPL18Q07020 188 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF616Q08AN1 781 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 PRSS8Q16651 343 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RPEL1Q2QD12 228 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF829Q3KNS6 432 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 LIN52Q52LA3 116 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RNASE13Q5GAN3 156 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SLC25A34Q6PIV7 304 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 IGFL1Q6UW32 110 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 WDR82Q6UXN9 313 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SLC35E3Q7Z769 313 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RBM45Q8IUH3 476 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 UBE2DNLQ8IWF7 75 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR6V1Q8N148 313 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 Q8N2B8 174 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 INO80EQ8NBZ0 244 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR9Q1Q8NGQ5 310 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR13G1Q8NGZ3 307 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR5J2Q8NH18 312 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 MFSD8Q8NHS3 518 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TCP10LQ8TDR4 215 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GPX8Q8TED1 209 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TWIST2Q8WVJ9 160 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SGTBQ96EQ0 304 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SLC25A44Q96H78 314 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GAFA1Q96PS6 74 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 OR4C12Q96R67 309 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 HSPB9Q9BQS6 159 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF2Q9BSG1 426 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 FAM103A1Q9BTL3 118 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TTTY10Q9BZA0 68 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TOLLIPQ9H0E2 274 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TLNRD1Q9H1K6 362 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 SYT4Q9H2B2 425 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 CACYBPQ9HB71 228 aaKnown RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZC4H2Q9NQZ6 224 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM100Q9NV29 134 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 C1orf109Q9NX04 203 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 RHBDL2Q9NX52 303 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 GLS2Q9UI32 602 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF443Q9Y2A4 671 aaPredicted RBP0.85□□□□□ -2.27
PRPF39-208ENST00000554785 NDUFAF1Q9Y375 327 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 DNAJC15Q9Y5T4 150 aa0.85□□□□□ -2.27
PRPF39-208ENST00000554785 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 PKD1P98161 4303 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 HMCN2Q8NDA2 5059 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 IGKV3-7A0A075B6H7 116 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 TRAV36DV7A0A075B6V5 113 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV2-26A0A0B4J1V2 119 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV7-4-1A0A0J9YVY3 117 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 FAM159BA6NKW6 160 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 RFPL4AA6NLU0 287 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 OR2AT4A6NND4 320 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 IQCF6A8MYZ5 107 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 OR11H12B2RN74 326 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM114B3SHH9 223 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 RFPL4AL1F8VTS6 287 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 PLPP3O14495 311 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 SIVA1O15304 175 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 OR2T1O43869 369 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 TPST1O60507 370 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 SLC16A7O60669 478 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 CNIH1O95406 144 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 LHBP01229 141 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 TAC1P20366 129 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 MSR1P21757 451 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 BGNP21810 368 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 CRABP2P29373 138 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 MAGEA6P43360 314 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 CLDN8P56748 225 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 RAB11AP62491 216 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 SLC35B1P78383 322 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 ENDOGQ14249 297 aaKnown RBP0.84□□□□□ -2.27
PRPF39-208ENST00000554785 GNA13Q14344 377 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 OR1Q1Q15612 314 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 KCNJ8Q15842 424 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 RAB11BQ15907 218 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 YIF1BQ5BJH7 314 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 LGALS9CQ6DKI2 356 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 C4orf22Q6V702 233 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 FAM122BQ7Z309 247 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 SPATA12Q7Z6I5 190 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 LRRC75AQ8NAA5 344 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 SLC26A10Q8NG04 563 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 OR51L1Q8NGJ5 315 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 OR2T27Q8NH04 317 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 OR51A7Q8NH64 312 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms