RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 MFFQ9GZY8 342 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 GSKIPQ9P0R6 139 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 MBD2Q9UBB5 411 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 ZMAT5Q9UDW3 170 aaKnown RBP8.19□□□□□ -1.1
SHMT2-215ENST00000554656 NSG2Q9Y328 171 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 FBXO7Q9Y3I1 522 aa8.19□□□□□ -1.1
SHMT2-215ENST00000554656 H0YIZ8 118 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 K7EPK0 472 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 ARPC5O15511 151 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 SOX15O60248 233 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 DEDDO75618 318 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 S1PR2O95136 353 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 LY86O95711 162 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 IGKV1-5P01602 117 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 HLA-DRB1P01911 266 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 APOA2P02652 100 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 MBPP02686 304 aaPredicted RBP8.18□□□□□ -1.1
SHMT2-215ENST00000554656 NQO2P16083 231 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 CXCL2P19875 107 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 PVALBP20472 110 aaPredicted RBP8.18□□□□□ -1.1
SHMT2-215ENST00000554656 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 ID3Q02535 119 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 C5orf64Q2M2E5 130 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 GRPEL2Q8TAA5 225 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 DCUN1D4Q92564 292 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 GPR146Q96CH1 333 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 AQP10Q96PS8 301 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 PARP11Q9NR21 331 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 ZNF256Q9Y2P7 627 aaPredicted RBP8.18□□□□□ -1.1
SHMT2-215ENST00000554656 DNAH7Q8WXX0 4024 aa8.18□□□□□ -1.1
SHMT2-215ENST00000554656 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 TRAV41A0A0B4J266 112 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 A0A0G2JRQ6 117 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 RNF222A6NCQ9 220 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 MARCH11A6NNE9 402 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 NBR2O15453 112 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 FCGR3BO75015 233 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 NDUFA3O95167 84 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 HRASP01112 189 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 OR8U8P0C7N1 319 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 MC5RP33032 325 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 S100A10P60903 97 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 ERVK-16P61578 105 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 ZNF616Q08AN1 781 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 OPCMLQ14982 345 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 AARDQ4LEZ3 155 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 TMUB2Q71RG4 321 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 OR5AN1Q8NGI8 311 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 OR1N2Q8NGR9 330 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 OR1S1Q8NH92 325 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 OSR1Q8TAX0 266 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-215ENST00000554656 C11orf1Q9H5F2 150 aa8.17□□□□□ -1.1
SHMT2-215ENST00000554656 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-215ENST00000554656 WRBO00258 174 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 MED6O75586 246 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 EGR2P11161 476 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-215ENST00000554656 TNCP24821 2201 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 P2RY1P47900 373 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 RAB9AP51151 201 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 CRIP2P52943 208 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-215ENST00000554656 SLURP1P55000 103 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 TAS2R30P59541 319 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 IFITM2Q01629 132 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 TMEM177Q53S58 311 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 ZNF767PQ75MW2 155 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 H2BFWTQ7Z2G1 175 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 PDPNQ86YL7 162 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 NPBQ8NG41 125 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 RAB40CQ96S21 281 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 ARL6Q9H0F7 186 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 TPSG1Q9NRR2 321 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 SLC35D1Q9NTN3 355 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 OR5AC2Q9NZP5 309 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 CACNG5Q9UF02 275 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 RCL1Q9Y2P8 373 aaKnown RBP8.16□□□□□ -1.1
SHMT2-215ENST00000554656 BOLA1Q9Y3E2 137 aa8.16□□□□□ -1.1
SHMT2-215ENST00000554656 LSM5Q9Y4Y9 91 aaKnown RBP8.16□□□□□ -1.1
SHMT2-215ENST00000554656 DYNC2H1Q8NCM8 4307 aaKnown RBP8.15□□□□□ -1.1
SHMT2-215ENST00000554656 KANTRA0A1W2PQU2 76 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 FCN1O00602 326 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 OVOL1O14753 267 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 TAAR5O14804 337 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 BCL2L11O43521 198 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 SCGB1D2O95969 90 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 KRASP01116 189 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 FGF2P09038 288 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 ECSCRQ19T08 205 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 DMBX1Q8NFW5 382 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 OR52E5Q8NH55 327 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 DLX4Q92988 240 aaPredicted RBP8.15□□□□□ -1.1
SHMT2-215ENST00000554656 FBXL15Q9H469 300 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms