RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 MARCH11A6NNE9 402 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 INMT-MINDY4F8WBC2 141 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 KRASP01116 189 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 IGKV1-5P01602 117 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 SRPXP78539 464 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 PRR20EP86478 221 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 PRR20CP86479 221 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 PRR20DP86480 221 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 PRR20BP86481 221 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 PRR20AP86496 221 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 DHRS2Q13268 280 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 PRSS8Q16651 343 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 ANKRD55Q3KP44 614 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 OR4A47Q6IF82 309 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 OR4A5Q8NH83 315 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 RBPMSQ93062 196 aaKnown RBP12.78□□□□□ -0.36
NEK9-204ENST00000554258 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
NEK9-204ENST00000554258 IGHV7-81A0A0B4J1V7 117 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 A0A0B4J2A0 478 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 UPK2O00526 184 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 ATG12O94817 140 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 VAMP1P23763 118 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 G6PCP35575 357 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 SSBP2P81877 361 aaPredicted RBP12.77□□□□□ -0.37
NEK9-204ENST00000554258 OXA1LQ15070 435 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 RGS21Q2M5E4 152 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 TRIM16LQ309B1 348 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 ZNF562Q6V9R5 426 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 LGI3Q8N145 548 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 MITD1Q8WV92 249 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 LSM10Q969L4 123 aaKnown RBP12.77□□□□□ -0.37
NEK9-204ENST00000554258 HSPB9Q9BQS6 159 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 PLEKHA3Q9HB20 300 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 TMEM140Q9NV12 185 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 ZNF580Q9UK33 172 aa12.77□□□□□ -0.37
NEK9-204ENST00000554258 IGHV4OR15-8A0A075B7B6 117 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 A0A087WW49 117 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 DUXBA0A1W2PPF3 345 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 KBTBD11O94819 623 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 IGF1P05019 195 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 ERVK-16P61578 105 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 CX3CL1P78423 397 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 PJVKQ0ZLH3 352 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 C4orf46Q504U0 113 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 SSX9Q7RTT3 188 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 MMD2Q8IY49 270 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 DMBX1Q8NFW5 382 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 ZNF430Q9H8G1 570 aaPredicted RBP12.76□□□□□ -0.37
NEK9-204ENST00000554258 PRR13Q9NZ81 148 aa12.76□□□□□ -0.37
NEK9-204ENST00000554258 TRAV3A0A0B4J244 114 aa12.75□□□□□ -0.37
NEK9-204ENST00000554258 A0A0G2JRQ6 117 aa12.75□□□□□ -0.37
NEK9-204ENST00000554258 PRAF2O60831 178 aa12.75□□□□□ -0.37
NEK9-204ENST00000554258 HLA-AP01891 365 aaKnown RBP12.75□□□□□ -0.37
NEK9-204ENST00000554258 EGR2P11161 476 aaPredicted RBP12.75□□□□□ -0.37
NEK9-204ENST00000554258 MAS1LP35410 378 aa12.75□□□□□ -0.37
NEK9-204ENST00000554258 RAB9AP51151 201 aa12.75□□□□□ -0.37
NEK9-204ENST00000554258 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
NEK9-204ENST00000554258 TMEM268Q5VZI3 342 aa12.75□□□□□ -0.37
NEK9-204ENST00000554258 FAM219AQ8IW50 185 aa12.75□□□□□ -0.37
NEK9-204ENST00000554258 ZNF431Q8TF32 576 aaPredicted RBP12.75□□□□□ -0.37
NEK9-204ENST00000554258 SNRPGP15A8MWD9 76 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 CREBL2O60519 120 aaPredicted RBP12.74□□□□□ -0.37
NEK9-204ENST00000554258 DHFRP00374 187 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 CA2P00918 260 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 OR9G9P0C7N8 305 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 NDPQ00604 133 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 PLGLAQ15195 96 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 AARDQ4LEZ3 155 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 NMSQ5H8A3 153 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 H2BFWTQ7Z2G1 175 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 LYZL2Q7Z4W2 148 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 SLC35G3Q8N808 338 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 OR52B4Q8NGK2 314 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 CLCC1Q96S66 551 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 SEC22CQ9BRL7 303 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 WSB1Q9Y6I7 421 aa12.74□□□□□ -0.37
NEK9-204ENST00000554258 A0A0B4J293 547 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 DBX1A6NMT0 343 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 PPIFP30405 207 aaKnown RBP12.73□□□□□ -0.37
NEK9-204ENST00000554258 RPL8P62917 257 aaKnown RBP12.73□□□□□ -0.37
NEK9-204ENST00000554258 EWSR1Q01844 656 aaKnown RBP eCLIP12.73□□□□□ -0.37
NEK9-204ENST00000554258 Q6ZRM9 215 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 MINDY2Q8NBR6 621 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 COQ8AQ8NI60 647 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 GPR146Q96CH1 333 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 RRNAD1Q96FB5 475 aaKnown RBP12.73□□□□□ -0.37
NEK9-204ENST00000554258 TMEM14BQ9NUH8 114 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 TMED3Q9Y3Q3 217 aa12.73□□□□□ -0.37
NEK9-204ENST00000554258 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
NEK9-204ENST00000554258 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
NEK9-204ENST00000554258 LGALS1P09382 135 aaKnown RBP12.72□□□□□ -0.37
NEK9-204ENST00000554258 HLA-GP17693 338 aa12.72□□□□□ -0.37
NEK9-204ENST00000554258 AKR1C2P52895 323 aa12.72□□□□□ -0.37
NEK9-204ENST00000554258 FXYD3Q14802 87 aa12.72□□□□□ -0.37
NEK9-204ENST00000554258 C19orf54Q5BKX5 351 aa12.72□□□□□ -0.37
NEK9-204ENST00000554258 GPN1Q9HCN4 374 aaPredicted RBP12.72□□□□□ -0.37
NEK9-204ENST00000554258 COA4Q9NYJ1 87 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms