RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 TMEM217Q8N7C4 229 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 OR4S2Q8NH73 311 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 COQ8AQ8NI60 647 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 MRPL30Q8TCC3 161 aaKnown RBP1.97□□□□□ -2.09
PRPF39-205ENST00000554081 MARCH1Q8TCQ1 289 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 MARC2Q969Z3 335 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 Q96M66 194 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 SRSF8Q9BRL6 282 aaKnown RBP1.97□□□□□ -2.09
PRPF39-205ENST00000554081 FUNDC2Q9BWH2 189 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 ABCG5Q9H222 651 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 GEMIN7Q9H840 131 aaKnown RBP1.97□□□□□ -2.09
PRPF39-205ENST00000554081 ZNF430Q9H8G1 570 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-205ENST00000554081 SERTAD4Q9NUC0 356 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 SDHAF2Q9NX18 166 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 THYN1Q9P016 225 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 KCNIP3Q9Y2W7 256 aa1.97□□□□□ -2.09
PRPF39-205ENST00000554081 RBMX2Q9Y388 322 aaKnown RBP1.97□□□□□ -2.09
PRPF39-205ENST00000554081 TRAV3A0A0B4J244 114 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 IGKV1D-13A0A0B4J2D9 117 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 A0A0G2JLM5 398 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 A0A1B0GV50 99 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 TMEM213A2RRL7 107 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 A6NDX4 124 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 FAM90A7PA6NKC0 464 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 ZNF785A8K8V0 405 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 FAM90A22PA8MWA6 464 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 FAM90A12PA8MX19 464 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 A8MXK9 166 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 FAM90A23PA8MXZ1 464 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 LINC01619G3V211 115 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 OGG1O15527 345 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 PAGE4O60829 102 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 S1PR2O95136 353 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 CD3DP04234 171 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 OR8U8P0C7N1 319 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 CT45A6P0DMU7 189 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 CT45A5P0DMU8 189 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 CT45A7P0DMV0 189 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 IGKV1-13P0DP09 117 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 CAV2P51636 162 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 PIGPP57054 158 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 LYZP61626 148 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 TPBGQ13641 420 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 EXOSC2Q13868 293 aaKnown RBP1.96□□□□□ -2.09
PRPF39-205ENST00000554081 PSG5Q15238 335 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 MLANAQ16655 118 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 TMEM42Q69YG0 159 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 DGAT2L7PQ6IED9 249 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 CCDC190Q86UF4 302 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 LYSMD2Q8IV50 215 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 Q8N9W7 124 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 ZNF383Q8NA42 475 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 RAB24Q969Q5 203 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 C10orf35Q96D05 121 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 WDR89Q96FK6 387 aaPredicted RBP1.96□□□□□ -2.09
PRPF39-205ENST00000554081 RCHY1Q96PM5 261 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 NABP2Q9BQ15 211 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 SEC22CQ9BRL7 303 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 GABARAPL1Q9H0R8 117 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 RANGRFQ9HD47 186 aaPredicted RBP1.96□□□□□ -2.09
PRPF39-205ENST00000554081 ANXA10Q9UJ72 324 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 MMP24Q9Y5R2 645 aa1.96□□□□□ -2.09
PRPF39-205ENST00000554081 DNHD1Q96M86 4753 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 A0A1W2PPI3 338 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SHISA3A0PJX4 238 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 PROP1O75360 226 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 EIF3GO75821 320 aaKnown RBP eCLIP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR2A4O95047 310 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 PPYP01298 95 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 HSPB1P04792 205 aaKnown RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 ZP3P21754 424 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 MPZP25189 248 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 PAFAH1B2P68402 229 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SSX1Q16384 188 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 VAX1Q5SQQ9 334 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 C9orf66Q5T8R8 295 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 TMEM268Q5VZI3 342 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 CNIH2Q6PI25 160 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF497Q6ZNH5 498 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 Q6ZNX1 250 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SLC25A48Q6ZT89 311 aaKnown RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 TCF23Q7RTU1 214 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR8I2Q8N0Y5 310 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 TOMM5Q8N4H5 51 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 C11orf42Q8N5U0 333 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 C5orf56Q8N8D9 126 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR52I2Q8NH67 350 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 PIFOQ8TCI5 191 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 FAM210BQ96KR6 192 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 HYLS1Q96M11 299 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 PACRGQ96M98 296 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 OR2A7Q96R45 310 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 MEGF9Q9H1U4 602 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SEBOXQ9HB31 216 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 AURKAIP1Q9NWT8 199 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-205ENST00000554081 FBLN5Q9UBX5 448 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 SMPXQ9UHP9 88 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 JPT1Q9UK76 154 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 RAB26Q9ULW5 256 aa1.96□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF256Q9Y2P7 627 aaPredicted RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms