RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PYDC2Q56P42 97 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 UNQ5815/PRO19632Q6UWF5 114 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 TMEM182Q6ZP80 229 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-220ENST00000553491 SSX9Q7RTT3 188 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 PPP1R27Q86WC6 154 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF645Q8N7E2 425 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 Q8N9W7 124 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF383Q8NA42 475 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 OR5T1Q8NG75 326 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 OR8H1Q8NGG4 311 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 GRPEL2Q8TAA5 225 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 CASTOR1Q8WTX7 329 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 S100ZQ8WXG8 99 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 ISOC1Q96CN7 298 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 ADTRPQ96IZ2 230 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 OR5B12Q96R08 314 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 CITED1Q99966 193 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 HSPB9Q9BQS6 159 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 AGMATQ9BSE5 352 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 FAM103A1Q9BTL3 118 aaKnown RBP3.65□□□□□ -1.83
ATXN3-220ENST00000553491 GON7Q9BXV9 100 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 PLSCR3Q9NRY6 295 aa3.65□□□□□ -1.83
ATXN3-220ENST00000553491 A0A087WYN8 130 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 TRAV41A0A0B4J266 112 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 A4D1N5 150 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 FABP12A6NFH5 140 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 G3V318 75 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 H3BMQ9 156 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 ATP6V0E1O15342 81 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 PRAF2O60831 178 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 SLC22A5O76082 557 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 CA2P00918 260 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 PPYP01298 95 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 IGHG2P01859 326 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 OPN1MWP04001 364 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 IGKV1-16P04430 117 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 OPN1MW2P0DN77 364 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 OPN1MW3P0DN78 364 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 S100GP29377 79 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 DUTP33316 252 aaKnown RBP3.64□□□□□ -1.83
ATXN3-220ENST00000553491 HRH1P35367 487 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 NKX2-1P43699 371 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-220ENST00000553491 LGALS7P47929 136 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 INPP1P49441 399 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF137PP52743 207 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 PJVKQ0ZLH3 352 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 FXYD3Q14802 87 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 C5orf64Q2M2E5 130 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 VMA21Q3ZAQ7 101 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 AADACL3Q5VUY0 350 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 IDO2Q6ZQW0 420 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 Q6ZS49 121 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 KCTD9Q7L273 389 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 NRARPQ7Z6K4 114 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 PDPNQ86YL7 162 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 LAX1Q8IWV1 398 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 VKORC1L1Q8N0U8 176 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 Q8N2B8 174 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 STPG2Q8N412 459 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 Q8N6K4 173 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-220ENST00000553491 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 LFNGQ8NES3 379 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 OR4F17Q8NGA8 305 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 OR51H1Q8NH63 302 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 DYNC2LI1Q8TCX1 351 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 C15orf40Q8WUR7 153 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 PHLDA1Q8WV24 401 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-220ENST00000553491 DUX3Q96PT4 197 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 OR4F4Q96R69 305 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 CABLES2Q9BTV7 478 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 HINT2Q9BX68 163 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 OR51J1Q9H342 316 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 HRASLSQ9HDD0 168 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 GSN-AS1Q9NRJ2 163 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 KLK11Q9UBX7 282 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 GAB2Q9UQC2 676 aa3.64□□□□□ -1.83
ATXN3-220ENST00000553491 RBMX2Q9Y388 322 aaKnown RBP3.64□□□□□ -1.83
ATXN3-220ENST00000553491 TSSC4Q9Y5U2 329 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-220ENST00000553491 SORL1Q92673 2214 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 LINC00854A0A1B0GVQ3 168 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 MSGN1A6NI15 193 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 SRRM4A7MD48 611 aaKnown RBP3.63□□□□□ -1.83
ATXN3-220ENST00000553491 CIDEAO60543 219 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 RAB3DO95716 219 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 HRASP01112 189 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 IGHV3-11P01762 117 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 TRGV3P03979 118 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 RLN1P04808 185 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 SPP1P10451 314 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 MT3P25713 68 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 RCVRNP35243 200 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 LPAR6P43657 344 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 LINC01547P58512 204 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-220ENST00000553491 RPL30P62888 115 aaKnown RBP3.63□□□□□ -1.83
ATXN3-220ENST00000553491 CATR1Q13166 79 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF846Q147U1 533 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 ACTBL2Q562R1 376 aa3.63□□□□□ -1.83
ATXN3-220ENST00000553491 RNASE10Q5GAN6 216 aaKnown RBP3.63□□□□□ -1.83
ATXN3-220ENST00000553491 ZNF660Q6AZW8 331 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms