RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ZNF114Q8NC26 417 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 OR51S1Q8NGJ8 323 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 VN1R17PQ8TDU5 208 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 TMEM230Q96A57 120 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 EEF1AKMT3Q96AZ1 226 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 CXorf58Q96LI9 332 aa14.61□□□□□ -0.07
PTCH1-227ENST00000553256 KMT2CQ8NEZ4 4911 aaKnown RBP14.6□□□□□ -0.07
PTCH1-227ENST00000553256 IZUMO1RA6ND01 250 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 A8MWP6 167 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 DISC1C4P0D8 188 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 B3GALNT1O75752 331 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 CLEC3BP05452 202 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 DEFA4P12838 97 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 ETV6P41212 452 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 HSPE1P61604 102 aaKnown RBP14.6□□□□□ -0.07
PTCH1-227ENST00000553256 Q6ZRM9 215 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 H2BFWTQ7Z2G1 175 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 ATP6V0BQ99437 205 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 TMEM222Q9H0R3 208 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 COPZ2Q9P299 210 aa14.6□□□□□ -0.07
PTCH1-227ENST00000553256 TMEM213A2RRL7 107 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 CRYM-AS1A6NIL9 109 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 C2orf70A6NJV1 201 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 ARL3P36405 182 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 TATDN3Q17R31 274 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 CCDC71LQ8N9Z2 235 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 OR1P1Q8NH06 330 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 PRRT1Q99946 306 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 NAA60Q9H7X0 242 aa14.59□□□□□ -0.07
PTCH1-227ENST00000553256 OR5AC1P0C628 307 aa14.58□□□□□ -0.08
PTCH1-227ENST00000553256 UNQ9165/PRO28630Q6UXU0 137 aa14.58□□□□□ -0.08
PTCH1-227ENST00000553256 SCARB1Q8WTV0 552 aa14.58□□□□□ -0.08
PTCH1-227ENST00000553256 TMEM56Q96MV1 263 aa14.58□□□□□ -0.08
PTCH1-227ENST00000553256 ZNF436Q9C0F3 470 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-227ENST00000553256 PEMTQ9UBM1 199 aa14.58□□□□□ -0.08
PTCH1-227ENST00000553256 SMAD5-AS1Q9Y6J3 95 aa14.58□□□□□ -0.08
PTCH1-227ENST00000553256 TENM3Q9P273 2699 aa14.58□□□□□ -0.08
PTCH1-227ENST00000553256 TEX13DA0A0J9YY54 714 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-227ENST00000553256 A8MZ25 164 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 I3L2K1 104 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 C8orf88P0DMB2 117 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 ADMP35318 185 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 SUPT4H1P63272 117 aaKnown RBP14.57□□□□□ -0.08
PTCH1-227ENST00000553256 CD69Q07108 199 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 DEFB114Q30KQ6 69 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 OR4A16Q8NH70 328 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 GALNT14Q96FL9 552 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 HINT2Q9BX68 163 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 ZC4H2Q9NQZ6 224 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 THYN1Q9P016 225 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 TMEM56-RWDD3S4R434 201 aa14.57□□□□□ -0.08
PTCH1-227ENST00000553256 ZNF785A8K8V0 405 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 ST8SIA3O43173 380 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 LY86O95711 162 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 FOLR2P14207 255 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 FCGR2BP31994 310 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-227ENST00000553256 GPR183P32249 361 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 SLC25A24Q6NUK1 477 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 SELENOHQ8IZQ5 122 aaKnown RBP14.56□□□□□ -0.08
PTCH1-227ENST00000553256 OR2K2Q8NGT1 345 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 C19orf73Q9NVV2 129 aa14.56□□□□□ -0.08
PTCH1-227ENST00000553256 CCDC160A6NGH7 325 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 TGOLN2O43493 480 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 TMEM187Q14656 261 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 BSXQ3C1V8 233 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 CD300EQ496F6 205 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-227ENST00000553256 Q8N402 240 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 OR1L6Q8NGR2 347 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 SDHCQ99643 169 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-227ENST00000553256 CHRDL1Q9BU40 450 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 SRRQ9GZT4 340 aa14.55□□□□□ -0.08
PTCH1-227ENST00000553256 C14orf166Q9Y224 244 aaKnown RBP14.55□□□□□ -0.08
PTCH1-227ENST00000553256 NHLRC4P0CG21 123 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-227ENST00000553256 CBLN1P23435 193 aa14.54□□□□□ -0.08
PTCH1-227ENST00000553256 CACNG8Q8WXS5 425 aa14.54□□□□□ -0.08
PTCH1-227ENST00000553256 C21orf62Q9NYP8 219 aa14.54□□□□□ -0.08
PTCH1-227ENST00000553256 SCP2D1Q9UJQ7 156 aa14.54□□□□□ -0.08
PTCH1-227ENST00000553256 IGHV3-21A0A0B4J1V1 117 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 CTSGP08311 255 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 FRMD6-AS1P0C7T7 363 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 AKR1C2P52895 323 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 DHODHQ02127 395 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 TRIM16LQ309B1 348 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 SBSPONQ8IVN8 264 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 FAM219AQ8IW50 185 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 DEDD2Q8WXF8 326 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 TMEM190Q8WZ59 177 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 RBPMSQ93062 196 aaKnown RBP14.53□□□□□ -0.08
PTCH1-227ENST00000553256 BSCL2Q96G97 398 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-227ENST00000553256 MLXQ9UH92 298 aa14.53□□□□□ -0.08
PTCH1-227ENST00000553256 CYB5BO43169 146 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 ATG12O94817 140 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 IGHV4-30-4P0DP06 118 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 FAM106AQ4KMX7 169 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 TM4SF20Q53R12 229 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 PYDC2Q56P42 97 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 SPINK9Q5DT21 86 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 LCN12Q6JVE5 192 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 OR52E5Q8NH55 327 aa14.52□□□□□ -0.09
PTCH1-227ENST00000553256 IL22RA2Q969J5 263 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms