RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MARCH11A6NNE9 402 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 F8W735 103 aaPredicted RBP10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 K7EIM0 57 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 XRCC3O43542 346 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 CTSGP08311 255 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 PTHLHP12272 177 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 AQP4P55087 323 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 ZNF773Q6PK81 442 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 ZNF818PQ6ZRF7 136 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 HOGA1Q86XE5 327 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 CENPSQ8N2Z9 138 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 RHBDL2Q9NX52 303 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 DAPK2Q9UIK4 370 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 OR51B2Q9Y5P1 312 aa10.37□□□□□ -0.75
CHMP1A-210ENST00000551981 IGHV3-49A0A0A0MS15 119 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 TRAV14DV4A0A0A6YYC5 116 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 SNAPC5O75971 98 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 EIF4EP06730 217 aaKnown RBP10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 TMEM17Q86X19 198 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 GBGT1Q8N5D6 347 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 LGALS14Q8TCE9 139 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 DGCR14Q96DF8 476 aaKnown RBP10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 OR10C1Q96KK4 312 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 TMEM56Q96MV1 263 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 BLOC1S6Q9UL45 172 aa10.36□□□□□ -0.75
CHMP1A-210ENST00000551981 ABCA13Q86UQ4 5058 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 C15orf61A6NNL5 157 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 DFFBO76075 338 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 MED14OSP0DP75 135 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 MFAP4P55083 255 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 HERV-K104P61576 105 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 TPRA1Q86W33 373 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 TSPAN14Q8NG11 270 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 OR1P1Q8NH06 330 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 GIMAP1Q8WWP7 306 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 TXN2Q99757 166 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 GINS3Q9BRX5 216 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 FKBP11Q9NYL4 201 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
CHMP1A-210ENST00000551981 TRAV18A0A075B6X5 111 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 F2RP25116 425 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 FGF9P31371 208 aaPredicted RBP10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 TMEM41BQ5BJD5 291 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 FAM90A2PQ658T7 463 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 SFXN4Q6P4A7 337 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 TCF24Q7RTU0 167 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 CADM3Q8N126 398 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 Q8NAQ8 132 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 SLC25A46Q96AG3 418 aa10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 NXF2Q9GZY0 626 aaKnown RBP10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
CHMP1A-210ENST00000551981 DNAH11Q96DT5 4516 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 A0A0A6YYH2 397 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 TRAV10A0A0B4J240 114 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 A6NJ64 397 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 KRASP01116 189 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 RLN1P04808 185 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 CBX5P45973 191 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 STHQ8IWL8 128 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 OR5AP2Q8NGF4 316 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 MISP3Q96FF7 219 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 TSC22D3Q99576 134 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 MS4A6AQ9H2W1 248 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 TXNL4BQ9NX01 149 aaKnown RBP10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 NSG2Q9Y328 171 aa10.33□□□□□ -0.76
CHMP1A-210ENST00000551981 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 TRAV2A0A0B4J234 112 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 IGHV4-28A0A0C4DH34 117 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 ST8SIA3O43173 380 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 GNG7O60262 68 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 FCER2P06734 321 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 MIFP14174 115 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 GNRHRP30968 328 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 G6PCP35575 357 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 LPAR6P43657 344 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 SCAND1P57086 179 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 DEFB131AP59861 70 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 CMTM1Q8IZ96 169 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 DYNC1H1Q14204 4646 aaKnown RBP10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 PKD1P98161 4303 aa10.32□□□□□ -0.76
CHMP1A-210ENST00000551981 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 I3L2K1 104 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 PGLYRP1O75594 196 aaPredicted RBP10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 PVRIGQ6DKI7 326 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 MORN3Q6PF18 240 aaPredicted RBP10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 Q6ZTC4 211 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 DUSP18Q8NEJ0 188 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 FCAMRQ8WWV6 532 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 ST8SIA2Q92186 375 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 ZNF414Q96IQ9 312 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 RNF126Q9BV68 326 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 TMEM231Q9H6L2 316 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 AUNIPQ9H7T9 357 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 DIABLOQ9NR28 239 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms