RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 MRPL52Q86TS9 123 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 TIMP3P35625 211 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 ZNF837Q96EG3 531 aaPredicted RBP13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 LTBRP36941 435 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 SEMA5BQ9P283 1151 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 CTSSP25774 331 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 ACTL10Q5JWF8 245 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 LINC01551Q86U37 167 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 OR4C13Q8NGP0 309 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 SSBP4Q9BWG4 385 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 C1QTNF5Q9BXJ0 243 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 CHODLQ9H9P2 273 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 RPP25LQ8N5L8 163 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 LPAR2Q9HBW0 351 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 IGKV3-7A0A075B6H7 116 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 J3QW42 95 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 RBPMS2Q6ZRY4 209 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 OR2K2Q8NGT1 345 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 ZNF257Q9Y2Q1 563 aa13.31□□□□□ -0.28
RBFOX1-212ENST00000550418 MOSP00540 346 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 FTH1P19P0C7X4 201 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 HIST1H1AQ02539 215 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 TIMP4Q99727 224 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 KLK15Q9H2R5 256 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 ST20Q9HBF5 79 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 WDR83OSQ9Y284 106 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 ZSWIM8A7E2V4 1837 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 MGAMO43451 1857 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 UMODP07911 640 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 AMMECR1LQ6DCA0 310 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 WNT9BO14905 357 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 REG1AP05451 166 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 TMEM171Q8WVE6 324 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 GPR82Q96P67 336 aa13.3□□□□□ -0.28
RBFOX1-212ENST00000550418 PRSS2P07478 247 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 PCOLCEQ15113 449 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 SLC25A45Q8N413 288 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 IFNL4K9M1U5 179 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 IGHV2-5P01817 119 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 AREGP15514 252 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 GATA2P23769 480 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 DMRTA2Q96SC8 542 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 LINC00470Q9BZP3 86 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 SIP14410 1827 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 UBE2V1Q13404 147 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 SLC25A53Q5H9E4 307 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 CHCHD2Q9Y6H1 151 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 MTCL1Q9Y4B5 1905 aaKnown RBP13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 CD33P20138 364 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 GCSAMLQ5JQS6 135 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 TMEM144Q7Z5S9 345 aa13.29□□□□□ -0.28
RBFOX1-212ENST00000550418 DEPPQ9NTK1 212 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 RALGAPA1Q6GYQ0 2036 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 TRBV20OR9-2A0A075B6H5 130 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 C10orf91Q5T1B1 145 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 OR5A1Q8NGJ0 315 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 SEC11AP67812 179 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 EMP1P54849 157 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 PSG9Q00887 426 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 NMSQ5H8A3 153 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 ORAOV1Q8WV07 137 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 SIGMAR1Q99720 223 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 AGMATQ9BSE5 352 aa13.28□□□□□ -0.28
RBFOX1-212ENST00000550418 CD3EP07766 207 aa13.27□□□□□ -0.28
RBFOX1-212ENST00000550418 COX6A1P12074 109 aa13.27□□□□□ -0.28
RBFOX1-212ENST00000550418 TMEM30BQ3MIR4 351 aa13.27□□□□□ -0.28
RBFOX1-212ENST00000550418 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.28
RBFOX1-212ENST00000550418 OR4X2Q8NGF9 303 aa13.27□□□□□ -0.28
RBFOX1-212ENST00000550418 RELQ04864 619 aaPredicted RBP13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 OR13A1Q8NGR1 328 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 PLPPR1Q8TBJ4 325 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 RAB1BQ9H0U4 201 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 A0A1B0GW15 77 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 A0A1W2PRE2 83 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 OR52E5Q8NH55 327 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 CACNG8Q8WXS5 425 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 ELOVL5Q9NYP7 299 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 LINC00271P0C7V0 271 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 GFRA1P56159 465 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 CX3CL1P78423 397 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 HGFACQ04756 655 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 PEAR1Q5VY43 1037 aaPredicted RBP13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 ZNRF1Q8ND25 227 aa13.27□□□□□ -0.29
RBFOX1-212ENST00000550418 TYMSP04818 313 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 IGKV1-12A0A0C4DH73 117 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 NDUFS8O00217 210 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 ATP5LO75964 103 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 QRFPP83859 136 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 ECSCRQ19T08 205 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 NRN1LQ496H8 165 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms