RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 LAX1Q8IWV1 398 aa11.87□□□□□ -0.51
COX6A1-203ENST00000550009 CMTM1Q8IZ96 169 aa11.87□□□□□ -0.51
COX6A1-203ENST00000550009 OR52B4Q8NGK2 314 aa11.87□□□□□ -0.51
COX6A1-203ENST00000550009 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
COX6A1-203ENST00000550009 LSM10Q969L4 123 aaKnown RBP11.87□□□□□ -0.51
COX6A1-203ENST00000550009 SRSF8Q9BRL6 282 aaKnown RBP11.87□□□□□ -0.51
COX6A1-203ENST00000550009 LCE6AA0A183 80 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 SMIM31A0A1B0GVY4 71 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 SNAPC5O75971 98 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 GABARAPO95166 117 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 IGKV1-5P01602 117 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 CD3DP04234 171 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 RORCP51449 518 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 SPCS2Q15005 226 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 FAAP20Q6NZ36 180 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 VN1R17PQ8TDU5 208 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 C20orf24Q9BUV8 137 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 SCPEP1Q9HB40 452 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 C21orf62Q9NYP8 219 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 EXTL2Q9UBQ6 330 aa11.86□□□□□ -0.51
COX6A1-203ENST00000550009 A0A0G2JRQ6 117 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 FGF2P09038 288 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 PPP5CP53041 499 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 EWSR1Q01844 656 aaKnown RBP eCLIP11.85□□□□□ -0.51
COX6A1-203ENST00000550009 ZNF124Q15973 351 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 SP6Q3SY56 376 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 LHFPL1Q86WI0 220 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 MISP3Q96FF7 219 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 CMTM3Q96MX0 182 aa11.85□□□□□ -0.51
COX6A1-203ENST00000550009 IGHV3OR16-13A0A075B7E8 117 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 IGHV3-74A0A0B4J1X5 117 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 I3L2K1 104 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 CTDSP2O14595 271 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 CTSGP08311 255 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 PGAM2P15259 253 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 UCP3P55916 312 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 Q56UQ5 140 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 OR2C3Q8N628 320 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 BORCS5Q969J3 196 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 MRPL27Q9P0M9 148 aaKnown RBP11.84□□□□□ -0.51
COX6A1-203ENST00000550009 PRNDQ9UKY0 176 aa11.84□□□□□ -0.51
COX6A1-203ENST00000550009 IFNA6P05013 189 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 P0C879 139 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 PIGPP57054 158 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 ODF3L2Q3SX64 289 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 H2BFWTQ7Z2G1 175 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 BSCL2Q96G97 398 aaPredicted RBP11.83□□□□□ -0.52
COX6A1-203ENST00000550009 OVOL2Q9BRP0 275 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 THYN1Q9P016 225 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 MRPL36Q9P0J6 103 aaKnown RBP11.83□□□□□ -0.52
COX6A1-203ENST00000550009 MTFP1Q9UDX5 166 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 UFC1Q9Y3C8 167 aa11.83□□□□□ -0.52
COX6A1-203ENST00000550009 A0A0B4J293 547 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 MT-CO2P00403 227 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 ZNF182P17025 639 aaPredicted RBP11.82□□□□□ -0.52
COX6A1-203ENST00000550009 ALDH3B2P48448 385 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 MLANAQ16655 118 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
COX6A1-203ENST00000550009 RBPMS2Q6ZRY4 209 aaKnown RBP11.82□□□□□ -0.52
COX6A1-203ENST00000550009 SLC16A13Q7RTY0 426 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 CADM3Q8N126 398 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 OR5B3Q8NH48 314 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 OR4A16Q8NH70 328 aa11.82□□□□□ -0.52
COX6A1-203ENST00000550009 PINX1Q96BK5 328 aaKnown RBP11.82□□□□□ -0.52
COX6A1-203ENST00000550009 KMT2AQ03164 3969 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 NDUFA4O00483 81 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 APOHP02749 345 aaPredicted RBP11.81□□□□□ -0.52
COX6A1-203ENST00000550009 CTSDP07339 412 aaPredicted RBP11.81□□□□□ -0.52
COX6A1-203ENST00000550009 ELLP55199 621 aaPredicted RBP11.81□□□□□ -0.52
COX6A1-203ENST00000550009 RND3P61587 244 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 PRCDQ00LT1 54 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 RNASE10Q5GAN6 216 aaKnown RBP11.81□□□□□ -0.52
COX6A1-203ENST00000550009 LPCAT3Q6P1A2 487 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 MZT2AQ6P582 158 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 Q6ZRM9 215 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 LILRB2Q8N423 598 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 OR13C8Q8NGS7 320 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 OR1P1Q8NH06 330 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 MARCH1Q8TCQ1 289 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 RNF2Q99496 336 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 GGTLC1Q9BX51 225 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
COX6A1-203ENST00000550009 BIRC6Q9NR09 4857 aa11.81□□□□□ -0.52
COX6A1-203ENST00000550009 ST8SIA3O43173 380 aa11.8□□□□□ -0.52
COX6A1-203ENST00000550009 HSPE1P61604 102 aaKnown RBP11.8□□□□□ -0.52
COX6A1-203ENST00000550009 HSD17B13Q7Z5P4 300 aaPredicted RBP11.8□□□□□ -0.52
COX6A1-203ENST00000550009 APRG1Q8IVJ8 170 aa11.8□□□□□ -0.52
COX6A1-203ENST00000550009 LHFPL5Q8TAF8 219 aa11.8□□□□□ -0.52
COX6A1-203ENST00000550009 MARC2Q969Z3 335 aa11.8□□□□□ -0.52
COX6A1-203ENST00000550009 C5orf66Q9H5L9 145 aa11.8□□□□□ -0.52
COX6A1-203ENST00000550009 FAM212BQ9NTI7 297 aaPredicted RBP11.8□□□□□ -0.52
COX6A1-203ENST00000550009 LOC102724200A0A096LPH7 203 aaPredicted RBP11.79□□□□□ -0.52
COX6A1-203ENST00000550009 TRAV25A0A0B4J276 109 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 IGHV3-66A0A0C4DH42 116 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 TSPAN4O14817 238 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms