RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 GSTZ1O43708 216 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-218ENST00000548945 LY6G6CO95867 125 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 PPYP01298 95 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 IL7P13232 177 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 FCGR2CP31995 323 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 HSD17B13Q7Z5P4 300 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-218ENST00000548945 HOGA1Q86XE5 327 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 SNX29P2Q8IUI4 249 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 KIR2DL5AQ8N109 375 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 KIR2DL5BQ8NHK3 375 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 SMIM4Q8WVI0 70 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 TMEM190Q8WZ59 177 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 GPHA2Q96T91 129 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 QTRT1Q9BXR0 403 aaKnown RBP9.56□□□□□ -0.88
PTCH1-218ENST00000548945 PLEKHA2Q9HB19 425 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
PTCH1-218ENST00000548945 CCL28Q9NRJ3 127 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 SELENOKQ9Y6D0 94 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 A0A0J9YWU9 116 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 GABARAPH6UMI1 98 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 TGOLN2O43493 480 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 TNFSF12O43508 249 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 DEFA1P59665 94 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 DEFA3P59666 94 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 BAK1Q16611 211 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 LAMTOR1Q6IAA8 161 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 SPSB3Q6PJ21 355 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-218ENST00000548945 LYG2Q86SG7 212 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 LYSMD2Q8IV50 215 aa9.55□□□□□ -0.88
PTCH1-218ENST00000548945 BSCL2Q96G97 398 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-218ENST00000548945 KLK5Q9Y337 293 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-218ENST00000548945 SULT1C2O00338 296 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 NDUFA4O00483 81 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 INPP1P49441 399 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 IFITM3Q01628 133 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 PMS2P11Q13670 270 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 CADM3Q8N126 398 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 TMEM217Q8N7C4 229 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 STPG3Q8N7X2 389 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 GIMAP1Q8WWP7 306 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 FCAMRQ8WWV6 532 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 TRIM63Q969Q1 353 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 RNF183Q96D59 192 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 SLC5A7Q9GZV3 580 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 AUNIPQ9H7T9 357 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 TMEM140Q9NV12 185 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 COMMD9Q9P000 198 aa9.54□□□□□ -0.88
PTCH1-218ENST00000548945 TRAV3A0A0B4J244 114 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 IGHV3-35A0A0C4DH35 117 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 K7EMT4 169 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 SERPINE2P07093 398 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 TRAPPC2P0DI81 140 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 TRAPPC2BP0DI82 140 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 PRSS3P35030 304 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 CBX5P45973 191 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 EWSR1Q01844 656 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTCH1-218ENST00000548945 RGS21Q2M5E4 152 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 GVQW1Q8N7I0 195 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 OR1L8Q8NGR8 309 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
PTCH1-218ENST00000548945 OR2T8A6NH00 312 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 S1PR2O95136 353 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 OR13C7P0DN81 318 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 PTHLHP12272 177 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 AP3S2P59780 193 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 ERVK-16P61578 105 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 SSBP1Q04837 148 aaKnown RBP9.52□□□□□ -0.89
PTCH1-218ENST00000548945 WT1-ASQ06250 92 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 RNASE12Q5GAN4 147 aaKnown RBP9.52□□□□□ -0.89
PTCH1-218ENST00000548945 ZNF818PQ6ZRF7 136 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 OR5AP2Q8NGF4 316 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 OR10W1Q8NGF6 305 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 OR51H1Q8NH63 302 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 OR52I2Q8NH67 350 aa9.52□□□□□ -0.89
PTCH1-218ENST00000548945 F11RQ9Y624 299 aaKnown RBP9.52□□□□□ -0.89
PTCH1-218ENST00000548945 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 MARCH11A6NNE9 402 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 FXYD4P59646 89 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 ASAH1Q13510 395 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 AADACL3Q5VUY0 350 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 SLC25A24Q6NUK1 477 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 TOMM5Q8N4H5 51 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 GPX8Q8TED1 209 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 DEDD2Q8WXF8 326 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 LSM10Q969L4 123 aaKnown RBP9.51□□□□□ -0.89
PTCH1-218ENST00000548945 NDUFA4L2Q9NRX3 87 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 C21orf62Q9NYP8 219 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 UBQLN2Q9UHD9 624 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 TBC1D24Q9ULP9 559 aa9.51□□□□□ -0.89
PTCH1-218ENST00000548945 PTTG1O95997 202 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 RPA2P15927 270 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 F2RP25116 425 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms