RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 MARC2Q969Z3 335 aa15.98■□□□□ 0.15
USP44-204ENST00000547951 C21orf62Q9NYP8 219 aa15.98■□□□□ 0.15
USP44-204ENST00000547951 PRNDQ9UKY0 176 aa15.98■□□□□ 0.15
USP44-204ENST00000547951 PI3P19957 117 aa15.97■□□□□ 0.15
USP44-204ENST00000547951 ELLP55199 621 aaPredicted RBP15.97■□□□□ 0.15
USP44-204ENST00000547951 MRGPRFQ96AM1 343 aa15.97■□□□□ 0.15
USP44-204ENST00000547951 BSCL2Q96G97 398 aaPredicted RBP15.97■□□□□ 0.15
USP44-204ENST00000547951 CMTM3Q96MX0 182 aa15.97■□□□□ 0.15
USP44-204ENST00000547951 UBQLN2Q9UHD9 624 aa15.97■□□□□ 0.15
USP44-204ENST00000547951 IGHV3-48P01763 117 aa15.96■□□□□ 0.15
USP44-204ENST00000547951 CTF1Q16619 201 aa15.96■□□□□ 0.15
USP44-204ENST00000547951 RBPMS2Q6ZRY4 209 aaKnown RBP15.96■□□□□ 0.15
USP44-204ENST00000547951 OR1L6Q8NGR2 347 aa15.96■□□□□ 0.15
USP44-204ENST00000547951 OR5B3Q8NH48 314 aa15.96■□□□□ 0.15
USP44-204ENST00000547951 C20orf24Q9BUV8 137 aa15.96■□□□□ 0.15
USP44-204ENST00000547951 KLK11Q9UBX7 282 aa15.96■□□□□ 0.15
USP44-204ENST00000547951 TRAV25A0A0B4J276 109 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 CYB5BO43169 146 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 RORCP51449 518 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 UCP3P55916 312 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 Q56UQ5 140 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 SPINK9Q5DT21 86 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 SLC38A6Q8IZM9 456 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 OR52I2Q8NH67 350 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 GGTLC1Q9BX51 225 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 C5orf66Q9H5L9 145 aa15.95■□□□□ 0.14
USP44-204ENST00000547951 DAZ1Q9NQZ3 744 aaKnown RBP15.95■□□□□ 0.14
USP44-204ENST00000547951 FAM25AB3EWG3 89 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 FAM25CB3EWG5 89 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 FAM25GB3EWG6 89 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 CTSGP08311 255 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 LPCAT3Q6P1A2 487 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 H2BFWTQ7Z2G1 175 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 OR2C3Q8N628 320 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 OR1P1Q8NH06 330 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 MISP3Q96FF7 219 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 TMEM56Q96MV1 263 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 OVOL2Q9BRP0 275 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 FKBP11Q9NYL4 201 aa15.94■□□□□ 0.14
USP44-204ENST00000547951 LOC102724200A0A096LPH7 203 aaPredicted RBP15.93■□□□□ 0.14
USP44-204ENST00000547951 I3L2K1 104 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 NDUFA4O00483 81 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 GABARAPO95166 117 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 ANKRD55Q3KP44 614 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 SPSB3Q6PJ21 355 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 OR4D10Q8NGI6 311 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 OR4A16Q8NH70 328 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 ABHD1Q96SE0 405 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 TSC22D3Q99576 134 aa15.93■□□□□ 0.14
USP44-204ENST00000547951 FAM212BQ9NTI7 297 aaPredicted RBP15.93■□□□□ 0.14
USP44-204ENST00000547951 PLECQ15149 4684 aaKnown RBP15.92■□□□□ 0.14
USP44-204ENST00000547951 IGKV1-5P01602 117 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 CD3DP04234 171 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 S100GP29377 79 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 ODF3L2Q3SX64 289 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 GPR107Q5VW38 600 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 LHFPL1Q86WI0 220 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 TP53RKQ96S44 253 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 SPAG8Q99932 426 aaPredicted RBP15.92■□□□□ 0.14
USP44-204ENST00000547951 EXTL2Q9UBQ6 330 aa15.92■□□□□ 0.14
USP44-204ENST00000547951 IGHV3-49A0A0A0MS15 119 aa15.91■□□□□ 0.14
USP44-204ENST00000547951 TSPAN4O14817 238 aa15.91■□□□□ 0.14
USP44-204ENST00000547951 PGAM2P15259 253 aa15.91■□□□□ 0.14
USP44-204ENST00000547951 PRCDQ00LT1 54 aa15.91■□□□□ 0.14
USP44-204ENST00000547951 ATP6V0BQ99437 205 aa15.91■□□□□ 0.14
USP44-204ENST00000547951 HYDINQ4G0P3 5121 aa15.91■□□□□ 0.14
USP44-204ENST00000547951 ALMS1Q8TCU4 4167 aa15.9■□□□□ 0.14
USP44-204ENST00000547951 MT-CO2P00403 227 aa15.9■□□□□ 0.14
USP44-204ENST00000547951 P0C879 139 aa15.9■□□□□ 0.14
USP44-204ENST00000547951 ZNF182P17025 639 aaPredicted RBP15.9■□□□□ 0.14
USP44-204ENST00000547951 PPP5CP53041 499 aa15.9■□□□□ 0.14
USP44-204ENST00000547951 HSPE1P61604 102 aaKnown RBP15.9■□□□□ 0.14
USP44-204ENST00000547951 MZT2AQ6P582 158 aa15.9■□□□□ 0.14
USP44-204ENST00000547951 MIXL1Q9H2W2 232 aa15.9■□□□□ 0.14
USP44-204ENST00000547951 EPPK1P58107 5090 aaKnown RBP15.89■□□□□ 0.13
USP44-204ENST00000547951 A0A0B4J293 547 aa15.89■□□□□ 0.13
USP44-204ENST00000547951 CTSDP07339 412 aaPredicted RBP15.89■□□□□ 0.13
USP44-204ENST00000547951 PIGPP57054 158 aa15.89■□□□□ 0.13
USP44-204ENST00000547951 RND3P61587 244 aa15.89■□□□□ 0.13
USP44-204ENST00000547951 EWSR1Q01844 656 aaKnown RBP eCLIP15.89■□□□□ 0.13
USP44-204ENST00000547951 RNASE10Q5GAN6 216 aaKnown RBP15.89■□□□□ 0.13
USP44-204ENST00000547951 ZNF114Q8NC26 417 aa15.89■□□□□ 0.13
USP44-204ENST00000547951 PINX1Q96BK5 328 aaKnown RBP15.89■□□□□ 0.13
USP44-204ENST00000547951 RNF2Q99496 336 aa15.89■□□□□ 0.13
USP44-204ENST00000547951 MTFP1Q9UDX5 166 aa15.89■□□□□ 0.13
USP44-204ENST00000547951 SMPXQ9UHP9 88 aa15.89■□□□□ 0.13
USP44-204ENST00000547951 IGHV3OR16-13A0A075B7E8 117 aa15.88■□□□□ 0.13
USP44-204ENST00000547951 IGHV3-74A0A0B4J1X5 117 aa15.88■□□□□ 0.13
USP44-204ENST00000547951 K7EMT4 169 aa15.88■□□□□ 0.13
USP44-204ENST00000547951 SP6Q3SY56 376 aa15.88■□□□□ 0.13
USP44-204ENST00000547951 C15orf62A8K5M9 175 aa15.87■□□□□ 0.13
USP44-204ENST00000547951 YIF1AO95070 293 aa15.87■□□□□ 0.13
USP44-204ENST00000547951 MFAP4P55083 255 aa15.87■□□□□ 0.13
USP44-204ENST00000547951 ZNF124Q15973 351 aa15.87■□□□□ 0.13
USP44-204ENST00000547951 FAAP20Q6NZ36 180 aa15.87■□□□□ 0.13
USP44-204ENST00000547951 AP3S1Q92572 193 aa15.87■□□□□ 0.13
USP44-204ENST00000547951 RHPN1-AS1Q9BWJ2 59 aa15.87■□□□□ 0.13
USP44-204ENST00000547951 NXF2Q9GZY0 626 aaKnown RBP15.87■□□□□ 0.13
USP44-204ENST00000547951 A0A0G2JRQ6 117 aa15.86■□□□□ 0.13
USP44-204ENST00000547951 IGHV7-4-1A0A0J9YVY3 117 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms