RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 C4orf3Q8WVX3 66 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 MARVELD1Q9BSK0 173 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 TRBV9A0A0B4J1U6 114 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 PTTG1O95997 202 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-213ENST00000546820 RHOGP84095 191 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 WT1-ASQ06250 92 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 KIAA0141Q14154 515 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-213ENST00000546820 AARDQ4LEZ3 155 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 GGNBP1Q5YKI7 109 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 SLC25A24Q6NUK1 477 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 C12orf45Q8N5I9 185 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-213ENST00000546820 UXS1Q8NBZ7 420 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 OR52B4Q8NGK2 314 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 SEC22CQ9BRL7 303 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 HIPK2Q9H2X6 1198 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 FBXL7Q9UJT9 491 aa10.71□□□□□ -0.69
PTCH1-213ENST00000546820 CEBPZOSA8MTT3 80 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 MED6O75586 246 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 PRH1P02810 166 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 MYCNOSP40205 109 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 RUNX1Q01196 453 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 KLK9Q2XQG4 91 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 PDLIM3Q53GG5 364 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-213ENST00000546820 FAM209BQ5JX69 171 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 OR2C3Q8N628 320 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 DPF1Q92782 380 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 KLK9Q9UKQ9 250 aa10.7□□□□□ -0.7
PTCH1-213ENST00000546820 F11RQ9Y624 299 aaKnown RBP10.7□□□□□ -0.7
PTCH1-213ENST00000546820 SNRPGP15A8MWD9 76 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 FAM90A26D6RGX4 464 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 CCL24O00175 119 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 ADAP1O75689 374 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 OR2J3O76001 311 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 PF4P02776 101 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 SPINK9Q5DT21 86 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 OR1P1Q8NH06 330 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 OR5B12Q96R08 314 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 HEYLQ9NQ87 328 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-213ENST00000546820 HSPB7Q9UBY9 170 aa10.69□□□□□ -0.7
PTCH1-213ENST00000546820 IGLV11-55A0A075B6I3 123 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 I3L521 148 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 PITX3O75364 302 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 IGHV3-11P01762 117 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 LGALS1P09382 135 aaKnown RBP10.68□□□□□ -0.7
PTCH1-213ENST00000546820 HTR2BP41595 481 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 TNFRSF9Q07011 255 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 RGS21Q2M5E4 152 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 PRR31Q5SQ13 230 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 C18orf65Q6ZTR6 163 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 NOXA1Q86UR1 476 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 OR1N2Q8NGR9 330 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 EEF1AKMT3Q96AZ1 226 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 CXorf58Q96LI9 332 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 GNB4Q9HAV0 340 aa10.68□□□□□ -0.7
PTCH1-213ENST00000546820 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-213ENST00000546820 NXPH3O95157 252 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 NDUFB8O95169 186 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 LY86O95711 162 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 TSPAN15O95858 294 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 HSPB1P04792 205 aaKnown RBP10.67□□□□□ -0.7
PTCH1-213ENST00000546820 ATP5IP56385 69 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-213ENST00000546820 ZNF616Q08AN1 781 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 IAH1Q2TAA2 248 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-213ENST00000546820 ZNF343Q6P1L6 599 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 ZNF114Q8NC26 417 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 OR11H1Q8NG94 326 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 P2RX4Q99571 388 aa10.67□□□□□ -0.7
PTCH1-213ENST00000546820 TRBV7-1A0A0A6YYK4 115 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 C5orf51A6NDU8 294 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 FAM25EA8MYX2 175 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 CORTO00230 105 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 OR8U8P0C7N1 319 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 RPP30P78346 268 aaKnown RBP10.66□□□□□ -0.7
PTCH1-213ENST00000546820 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 C19orf35Q6ZS72 473 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 VN1R17PQ8TDU5 208 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 DTD1Q8TEA8 209 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 MISP3Q96FF7 219 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 RAX2Q96IS3 184 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 CIB3Q96Q77 187 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-213ENST00000546820 RBKSQ9H477 322 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 GSKIPQ9P0R6 139 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 PEF1Q9UBV8 284 aaKnown RBP10.66□□□□□ -0.7
PTCH1-213ENST00000546820 U3KQ87 197 aa10.66□□□□□ -0.7
PTCH1-213ENST00000546820 ANKRD34BA5PLL1 514 aa10.65□□□□□ -0.7
PTCH1-213ENST00000546820 LINC01619G3V211 115 aa10.65□□□□□ -0.7
PTCH1-213ENST00000546820 WRBO00258 174 aa10.65□□□□□ -0.7
PTCH1-213ENST00000546820 IFNA10P01566 189 aa10.65□□□□□ -0.7
PTCH1-213ENST00000546820 SPNP16150 400 aa10.65□□□□□ -0.7
PTCH1-213ENST00000546820 ZP3P21754 424 aa10.65□□□□□ -0.7
PTCH1-213ENST00000546820 NKX2-1P43699 371 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-213ENST00000546820 EXOSC2Q13868 293 aaKnown RBP10.65□□□□□ -0.7
PTCH1-213ENST00000546820 GSG1LQ6UXU4 331 aa10.65□□□□□ -0.7
PTCH1-213ENST00000546820 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms