RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 C11orf40Q8WZ69 217 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 KLK6Q92876 244 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 SLC35B4Q969S0 331 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 WDR61Q9GZS3 305 aaKnown RBP0.6□□□□□ -2.31
CCDC38-204ENST00000546816 FAM96AQ9H5X1 160 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 ROS1P08922 2347 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 BRWD1Q9NSI6 2320 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 STRCQ7RTU9 1775 aa0.6□□□□□ -2.31
CCDC38-204ENST00000546816 EEF1E1-BLOC1S5C9J1V9 151 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 IGKV1-5P01602 117 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 UBBP0CG47 229 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 PRB4P10163 310 aaPredicted RBP0.59□□□□□ -2.31
CCDC38-204ENST00000546816 IFITM2Q01629 132 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 STX5Q13190 355 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 OR2F1Q13607 317 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 ZNF846Q147U1 533 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 GRK1Q15835 563 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 HIST3H3Q16695 136 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 DEFB115Q30KQ5 88 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 Q6ZS49 121 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 LRRC25Q8N386 305 aaPredicted RBP0.59□□□□□ -2.31
CCDC38-204ENST00000546816 PFN4Q8NHR9 129 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 MRPL30Q8TCC3 161 aaKnown RBP0.59□□□□□ -2.31
CCDC38-204ENST00000546816 DDI1Q8WTU0 396 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 DERL1Q9BUN8 251 aa0.59□□□□□ -2.31
CCDC38-204ENST00000546816 LSM5Q9Y4Y9 91 aaKnown RBP0.59□□□□□ -2.31
CCDC38-204ENST00000546816 IGKV2D-26A0A0A0MRZ7 120 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.58□□□□□ -2.32
CCDC38-204ENST00000546816 TMEM212A6NML5 194 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 IFNA5P01569 189 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 CALB1P05937 261 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H1EP10412 219 aaKnown RBP0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H2BOP23527 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H2BBP33778 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 EIF2B2P49770 351 aaKnown RBP0.58□□□□□ -2.32
CCDC38-204ENST00000546816 NKX2-5P52952 324 aaPredicted RBP0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H2BDP58876 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H2BCP62807 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 RUNX1Q01196 453 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST2H2BEQ16778 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.58□□□□□ -2.32
CCDC38-204ENST00000546816 AADACL3Q5VUY0 350 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 LPCAT4Q643R3 524 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 LCN15Q6UWW0 184 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 ZNF826PQ6ZT77 177 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 ZNF565Q8N9K5 539 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 OR51D1Q8NGF3 324 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 OR13C4Q8NGS5 318 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H2BHQ93079 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 TMEM106AQ96A25 262 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H2BNQ99877 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H2BMQ99879 126 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 REG4Q9BYZ8 158 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 CMTM6Q9NX76 183 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 TP73-AS1Q9UF72 201 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 DIDO1Q9BTC0 2240 aaKnown RBP0.58□□□□□ -2.32
CCDC38-204ENST00000546816 TTC21AQ8NDW8 1320 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 GPR98Q8WXG9 6306 aa0.58□□□□□ -2.32
CCDC38-204ENST00000546816 KCNK1O00180 336 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 SHBGP04278 402 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 HIST1H1TP22492 207 aaPredicted RBP0.57□□□□□ -2.32
CCDC38-204ENST00000546816 HIST2H3PS2Q5TEC6 136 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 RPL22L1Q6P5R6 122 aaKnown RBP0.57□□□□□ -2.32
CCDC38-204ENST00000546816 Q6ZQT0 140 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 DEFB128Q7Z7B8 93 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 IQCF2Q8IXL9 164 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 C12orf29Q8N999 325 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 AQP3Q92482 292 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 ODF3Q96PU9 254 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 OR52E6Q96RD3 313 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 MRPS26Q9BYN8 205 aaKnown RBP0.57□□□□□ -2.32
CCDC38-204ENST00000546816 GUCA1BQ9UMX6 200 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 MAST2Q6P0Q8 1798 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 MYOFQ9NZM1 2061 aa0.57□□□□□ -2.32
CCDC38-204ENST00000546816 RALGAPA2Q2PPJ7 1873 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 COL4A5P29400 1685 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 SNAPC4Q5SXM2 1469 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 TGIF2-C20orf24A0A0A6YYL0 155 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 HLA-DRB1P01911 266 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 CTSDP07339 412 aaPredicted RBP0.56□□□□□ -2.32
CCDC38-204ENST00000546816 HTR1AP08908 422 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 SPCS3P61009 180 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 SNRPD2P62316 118 aaKnown RBP0.56□□□□□ -2.32
CCDC38-204ENST00000546816 UBE2IP63279 158 aaKnown RBP0.56□□□□□ -2.32
CCDC38-204ENST00000546816 HBA1P69905 142 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 SPANXN3Q5MJ09 141 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 TEX36Q5VZQ5 186 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 C8orf74Q6P047 294 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 AAED1Q7RTV5 226 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 C20orf196Q8IYI0 205 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 TERB2Q8NHR7 220 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 MCFD2Q8NI22 146 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 IMP4Q96G21 291 aaKnown RBP0.56□□□□□ -2.32
CCDC38-204ENST00000546816 SCGB3A1Q96QR1 104 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 SERPINI1Q99574 410 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 NIPSNAP1Q9BPW8 284 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 TRABDQ9H4I3 376 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 FBXL12Q9NXK8 326 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 OR5AC2Q9NZP5 309 aa0.56□□□□□ -2.32
CCDC38-204ENST00000546816 CKLFQ9UBR5 152 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms