RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ATP6V0BQ99437 205 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 TMEM222Q9H0R3 208 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 NAA60Q9H7X0 242 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 NDUFA13Q9P0J0 144 aa9.06□□□□□ -0.96
YBX3-217ENST00000546164 F11RQ9Y624 299 aaKnown RBP9.06□□□□□ -0.96
YBX3-217ENST00000546164 A0A0B4J293 547 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 MFSD2BA6NFX1 497 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 CRYM-AS1A6NIL9 109 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 CDS2O95674 445 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 OR5AC1P0C628 307 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 FAUP35544 74 aaKnown RBP9.05□□□□□ -0.96
YBX3-217ENST00000546164 AKR1C2P52895 323 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 PRCDQ00LT1 54 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 SP6Q3SY56 376 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 PYDC2Q56P42 97 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 GPHB5Q86YW7 130 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 ZNF114Q8NC26 417 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 OR1P1Q8NH06 330 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 ZNF502Q8TBZ5 544 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 GLYATL2Q8WU03 294 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 PRR25Q96S07 402 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 HINT2Q9BX68 163 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 PEMTQ9UBM1 199 aa9.05□□□□□ -0.96
YBX3-217ENST00000546164 COL7A1Q02388 2944 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 TEX13DA0A0J9YY54 714 aaPredicted RBP9.04□□□□□ -0.96
YBX3-217ENST00000546164 PPP5D1E7EU14 171 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 INS-IGF2F8WCM5 200 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 LGALS9O00182 355 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 CSN3P07498 182 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 SPNP16150 400 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 MFAP2P55001 183 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 DHODHQ02127 395 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 TRIM16LQ309B1 348 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 AARDQ4LEZ3 155 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 DEFB121Q5J5C9 76 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 SPANXN2Q5MJ10 180 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 FAM219AQ8IW50 185 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 TOMM5Q8N4H5 51 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 OR2C3Q8N628 320 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 RRNAD1Q96FB5 475 aaKnown RBP9.04□□□□□ -0.96
YBX3-217ENST00000546164 GALNT14Q96FL9 552 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 B9D2Q9BPU9 175 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 SRRQ9GZT4 340 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 MCUBQ9NWR8 336 aa9.04□□□□□ -0.96
YBX3-217ENST00000546164 HUWE1Q7Z6Z7 4374 aaKnown RBP9.03□□□□□ -0.96
YBX3-217ENST00000546164 A0A0G2JRQ6 117 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 K7EIM0 57 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 OR2C1O95371 312 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 IGHV3-23P01764 117 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 CLEC3BP05452 202 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 GP9P14770 177 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 ARL3P36405 182 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 MECP2P51608 486 aaKnown RBP9.03□□□□□ -0.96
YBX3-217ENST00000546164 IZUMO4Q1ZYL8 232 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 SGPP2Q8IWX5 399 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 LHFPL5Q8TAF8 219 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 RBPMSQ93062 196 aaKnown RBP9.03□□□□□ -0.96
YBX3-217ENST00000546164 IL22RA2Q969J5 263 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 TMEM230Q96A57 120 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 PLEKHA3Q9HB20 300 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 S4R3C0 116 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 TMEM56-RWDD3S4R434 201 aa9.03□□□□□ -0.96
YBX3-217ENST00000546164 A8MWP6 167 aa9.02□□□□□ -0.97
YBX3-217ENST00000546164 LY86O95711 162 aa9.02□□□□□ -0.97
YBX3-217ENST00000546164 HLA-AP01891 365 aaKnown RBP9.02□□□□□ -0.97
YBX3-217ENST00000546164 FCGR2BP31994 310 aaPredicted RBP9.02□□□□□ -0.97
YBX3-217ENST00000546164 ERHP84090 104 aaKnown RBP9.02□□□□□ -0.97
YBX3-217ENST00000546164 ADAMTSL5Q6ZMM2 481 aa9.02□□□□□ -0.97
YBX3-217ENST00000546164 SELENOHQ8IZQ5 122 aaKnown RBP9.02□□□□□ -0.97
YBX3-217ENST00000546164 OR2K2Q8NGT1 345 aa9.02□□□□□ -0.97
YBX3-217ENST00000546164 C21orf62Q9NYP8 219 aa9.02□□□□□ -0.97
YBX3-217ENST00000546164 KCNIP3Q9Y2W7 256 aa9.02□□□□□ -0.97
YBX3-217ENST00000546164 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 ST8SIA3O43173 380 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 TGOLN2O43493 480 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 GPR183P32249 361 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
YBX3-217ENST00000546164 TMEM187Q14656 261 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 FAM106AQ4KMX7 169 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 PVRIGQ6DKI7 326 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 Q6ZRM9 215 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 HAPLN4Q86UW8 402 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 OR52E5Q8NH55 327 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 RNASE11Q8TAA1 199 aaKnown RBP9.01□□□□□ -0.97
YBX3-217ENST00000546164 SCARB1Q8WTV0 552 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 BSCL2Q96G97 398 aaPredicted RBP9.01□□□□□ -0.97
YBX3-217ENST00000546164 SLC25A21Q9BQT8 299 aaPredicted RBP9.01□□□□□ -0.97
YBX3-217ENST00000546164 PDCD10Q9BUL8 212 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 SMAD5-AS1Q9Y6J3 95 aa9.01□□□□□ -0.97
YBX3-217ENST00000546164 TMEM213A2RRL7 107 aa9□□□□□ -0.97
YBX3-217ENST00000546164 F8W735 103 aaPredicted RBP9□□□□□ -0.97
YBX3-217ENST00000546164 I3L2K1 104 aa9□□□□□ -0.97
YBX3-217ENST00000546164 J3QL48 77 aa9□□□□□ -0.97
YBX3-217ENST00000546164 IFNA17P01571 189 aa9□□□□□ -0.97
YBX3-217ENST00000546164 SRPXP78539 464 aa9□□□□□ -0.97
YBX3-217ENST00000546164 TMEM268Q5VZI3 342 aa9□□□□□ -0.97
YBX3-217ENST00000546164 LCN12Q6JVE5 192 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms