RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 Q6ZWC4 215 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 LRP11Q86VZ4 500 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 TMEM256Q8N2U0 113 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 CD177Q8N6Q3 437 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 C8orf31Q8N9H6 132 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 VSTM2AQ8TAG5 236 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 Q8TCH9 128 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 HSPB9Q9BQS6 159 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 DERL1Q9BUN8 251 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 HES7Q9BYE0 225 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF331Q9NQX6 463 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-225ENST00000545920 PLA2G3Q9NZ20 509 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 C1RLQ9NZP8 487 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 Q9UFV3 132 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 GOLT1BQ9Y3E0 138 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 CBY1Q9Y3M2 126 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 YTHDF2Q9Y5A9 579 aaKnown RBP5.3□□□□□ -1.56
SNHG1-225ENST00000545920 CACNA1AO00555 2505 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 MED12Q93074 2177 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 IGKV1D-17A0A075B6S4 117 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 FAM231BA6NCW3 169 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 PATE3B3GLJ2 98 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 K7EN84 100 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 WNT9BO14905 357 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 PROP1O75360 226 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF324O75467 553 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 OR2J3O76001 311 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 CA2P00918 260 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 SNRPCP09234 159 aaKnown RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 CECR9P0C854 216 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 PMCHP20382 165 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 CBLN1P23435 193 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 GLRXP35754 106 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 CA7P43166 264 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 CEBPDP49716 269 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 PRRX1P54821 245 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 MRPS11P82912 194 aaKnown RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 ERHP84090 104 aaKnown RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 PAX2Q02962 417 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 MEF2CQ06413 473 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 ALKBH6Q3KRA9 238 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 CENPWQ5EE01 88 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 GCSAMLQ5JQS6 135 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 TIMM23BQ5SRD1 257 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 OR4A47Q6IF82 309 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 VWA1Q6PCB0 445 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF705AQ6ZN79 300 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 Q6ZR03 302 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 TMEM136Q6ZRR5 245 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF114Q8NC26 417 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 OR5T1Q8NG75 326 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 OR2D3Q8NGH3 330 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 OR4P4Q8NGL7 312 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 GRAMD2BQ96HH9 432 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 NABP2Q9BQ15 211 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 DEFB127Q9H1M4 99 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 SAP30LQ9HAJ7 183 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 CBLN4Q9NTU7 201 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 DCAF16Q9NXF7 216 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 IDI2-AS1Q9NZ38 188 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 FOXJ2Q9P0K8 574 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 NAT8BQ9UHF3 227 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 TP53TG3Q9ULZ0 132 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 ZFP30Q9Y2G7 519 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 MRPS16Q9Y3D3 137 aaKnown RBP5.29□□□□□ -1.56
SNHG1-225ENST00000545920 OR51B2Q9Y5P1 312 aa5.29□□□□□ -1.56
SNHG1-225ENST00000545920 IGLV3-9A0A075B6K5 115 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 hADV38S2A0JD32 116 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 DIRC3C9JPN6 131 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 J3QR06 171 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 LYZL6O75951 148 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 APOA2P02652 100 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 APCSP02743 223 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 HIST1H1EP10412 219 aaKnown RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 SFTPCP11686 197 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 BTF3P20290 206 aaKnown RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 USF1P22415 310 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 CTRLP40313 264 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 IER3P46695 156 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 REG1BP48304 166 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 COMPP49747 757 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 KLF3P57682 345 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 LINC00310P59036 64 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 RPS20P60866 119 aaKnown RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 PSG5Q15238 335 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 IBA57Q5T440 356 aaKnown RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 ETFRF1Q6IPR1 90 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 PET117Q6UWS5 81 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF826PQ6ZT77 177 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 SLC25A48Q6ZT89 311 aaKnown RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 BHLHA15Q7RTS1 189 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 ABHD12Q8N2K0 398 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 LINC00482Q8N8I6 264 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF439Q8NDP4 499 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 RFESDQ8TAC1 157 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 UBALD1Q8TB05 177 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 ORAOV1Q8WV07 137 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 BORCS7Q96B45 105 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 IGF2BP2-AS1Q96M15 143 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 WFIKKN1Q96NZ8 548 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms