RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 OR8I2Q8N0Y5 310 aa12.91□□□□□ -0.34
LDLR-204ENST00000545707 OR9G1Q8NH87 305 aa12.91□□□□□ -0.34
LDLR-204ENST00000545707 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
LDLR-204ENST00000545707 CMTM2Q8TAZ6 248 aa12.91□□□□□ -0.34
LDLR-204ENST00000545707 RNASE7Q9H1E1 156 aaKnown RBP12.91□□□□□ -0.34
LDLR-204ENST00000545707 PLEKHA3Q9HB20 300 aa12.91□□□□□ -0.34
LDLR-204ENST00000545707 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
LDLR-204ENST00000545707 SLC45A2Q9UMX9 530 aa12.91□□□□□ -0.34
LDLR-204ENST00000545707 AKAP13Q12802 2813 aa12.91□□□□□ -0.34
LDLR-204ENST00000545707 OR7C2O60412 319 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 IGHV1-46P01743 117 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 CENPWQ5EE01 88 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 TIMM23BQ5SRD1 257 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 MMD2Q8IY49 270 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 UHRF2Q96PU4 802 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 GVINP1Q7Z2Y8 2422 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 TEX50A0A1B0GTY4 177 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 HELTA6NFD8 242 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 FCN1O00602 326 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 SERF1AO75920 110 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 TCL1AP56279 114 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 STUMQ69YW2 141 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 C1orf174Q8IYL3 243 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 C2orf88Q9BSF0 95 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 SLC35D1Q9NTN3 355 aa12.9□□□□□ -0.34
LDLR-204ENST00000545707 MT-CO2P00403 227 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 CRISP2P16562 243 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 REG1BP48304 166 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 LGALS4P56470 323 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 CCL8P80075 99 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 Q6ZWC4 215 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 C11orf52Q96A22 123 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 BTF3L4Q96K17 158 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 TBX15Q96SF7 602 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 V9GYV3 84 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 IGLV3-9A0A075B6K5 115 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 UPK2O00526 184 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 GNG4P50150 75 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 SUMO1P63165 101 aaKnown RBP12.89□□□□□ -0.35
LDLR-204ENST00000545707 MORN5Q5VZ52 161 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 ST6GALNAC3Q8NDV1 305 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
LDLR-204ENST00000545707 TRAV5A0A0B4J249 113 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.88□□□□□ -0.35
LDLR-204ENST00000545707 PARD6AQ9NPB6 346 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 PRNDQ9UKY0 176 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 DSCAML1Q8TD84 2053 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 A8MXE2 369 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 E7EUB6 86 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
LDLR-204ENST00000545707 RPEL1Q2QD12 228 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 PIP4P1Q86T03 277 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 NHLRC2Q8NBF2 726 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 BEND2Q8NDZ0 799 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 OR2T6Q8NHC8 308 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 SNHG12Q9BXW3 62 aa12.88□□□□□ -0.35
LDLR-204ENST00000545707 C9JCJ5 164 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 K7EM74 188 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 CDKN1AP38936 164 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 SSBP2P81877 361 aaPredicted RBP12.87□□□□□ -0.35
LDLR-204ENST00000545707 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 BAGE2Q86Y30 109 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 HSPB9Q9BQS6 159 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 RPUSD1Q9UJJ7 312 aaKnown RBP12.87□□□□□ -0.35
LDLR-204ENST00000545707 AREGP15514 252 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 CCL3L1P16619 93 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 SSTP61278 116 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 SELENOTP62341 195 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 TOMM20LQ6UXN7 152 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
LDLR-204ENST00000545707 ZADH2Q8N4Q0 377 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 LINC00479Q96M42 142 aa12.87□□□□□ -0.35
LDLR-204ENST00000545707 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
LDLR-204ENST00000545707 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 CHRNB4P30926 498 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 GATA4P43694 442 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 C1orf194Q5T5A4 169 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 ADTRPQ96IZ2 230 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 MRPL20Q9BYC9 149 aaKnown RBP12.86□□□□□ -0.35
LDLR-204ENST00000545707 TMEM106BQ9NUM4 274 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 CA1P00915 261 aaPredicted RBP12.86□□□□□ -0.35
LDLR-204ENST00000545707 RNASE2P10153 161 aaKnown RBP12.86□□□□□ -0.35
LDLR-204ENST00000545707 MGST1P10620 155 aaKnown RBP12.86□□□□□ -0.35
LDLR-204ENST00000545707 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 RTL8BQ17RB0 113 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 FAM103A1Q9BTL3 118 aaKnown RBP12.86□□□□□ -0.35
LDLR-204ENST00000545707 TECRQ9NZ01 308 aaKnown RBP12.86□□□□□ -0.35
LDLR-204ENST00000545707 RNF114Q9Y508 228 aa12.86□□□□□ -0.35
LDLR-204ENST00000545707 DIAPH2-AS1Q14236 149 aa12.85□□□□□ -0.35
LDLR-204ENST00000545707 CORO2AQ92828 525 aa12.85□□□□□ -0.35
LDLR-204ENST00000545707 PKDREJQ9NTG1 2253 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms