RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 TP53RKQ96S44 253 aa12.8□□□□□ -0.36
HOXD8-204ENST00000544999 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
HOXD8-204ENST00000544999 SLIRPQ9GZT3 109 aaKnown RBP12.8□□□□□ -0.36
HOXD8-204ENST00000544999 C6orf62Q9GZU0 229 aaPredicted RBP12.8□□□□□ -0.36
HOXD8-204ENST00000544999 PALMDQ9NP74 551 aa12.8□□□□□ -0.36
HOXD8-204ENST00000544999 ZC4H2Q9NQZ6 224 aa12.8□□□□□ -0.36
HOXD8-204ENST00000544999 ZNF320A2RRD8 509 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 TMEM213A2RRL7 107 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 DISC1C4P0D8 188 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 TGOLN2O43493 480 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 ATG12O94817 140 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
HOXD8-204ENST00000544999 CBLN1P23435 193 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 OR2C3Q8N628 320 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 OR1P1Q8NH06 330 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 MARCH1Q8TCQ1 289 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 ZNF436Q9C0F3 470 aaPredicted RBP12.79□□□□□ -0.36
HOXD8-204ENST00000544999 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 COL7A1Q02388 2944 aa12.79□□□□□ -0.36
HOXD8-204ENST00000544999 ZNF785A8K8V0 405 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 IGKV1-5P01602 117 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 P0C879 139 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 HSPE1P61604 102 aaKnown RBP12.78□□□□□ -0.36
HOXD8-204ENST00000544999 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 UNQ9165/PRO28630Q6UXU0 137 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 SCARB1Q8WTV0 552 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 BSCL2Q96G97 398 aaPredicted RBP12.78□□□□□ -0.36
HOXD8-204ENST00000544999 RCHY1Q96PM5 261 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 C21orf62Q9NYP8 219 aa12.78□□□□□ -0.36
HOXD8-204ENST00000544999 RSL24D1Q9UHA3 163 aaKnown RBP12.78□□□□□ -0.36
HOXD8-204ENST00000544999 IGHV3-21A0A0B4J1V1 117 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 OR2T8A6NH00 312 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 K7EIM0 57 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 GSTZ1O43708 216 aaPredicted RBP12.77□□□□□ -0.37
HOXD8-204ENST00000544999 UCP1P25874 307 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 AKR1C2P52895 323 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 ELLP55199 621 aaPredicted RBP12.77□□□□□ -0.37
HOXD8-204ENST00000544999 SURF2Q15527 256 aaPredicted RBP12.77□□□□□ -0.37
HOXD8-204ENST00000544999 TRIM16LQ309B1 348 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.37
HOXD8-204ENST00000544999 SPSB3Q6PJ21 355 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 UXS1Q8NBZ7 420 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 OR4C16Q8NGL9 310 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 CACNG8Q8WXS5 425 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 TM2D3Q9BRN9 247 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.37
HOXD8-204ENST00000544999 SLC2A8Q9NY64 477 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 C14orf166Q9Y224 244 aaKnown RBP12.77□□□□□ -0.37
HOXD8-204ENST00000544999 UFC1Q9Y3C8 167 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 CEPT1Q9Y6K0 416 aa12.77□□□□□ -0.37
HOXD8-204ENST00000544999 C8orf88P0DMB2 117 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 CD81P60033 236 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 ERHP84090 104 aaKnown RBP12.76□□□□□ -0.37
HOXD8-204ENST00000544999 IZUMO4Q1ZYL8 232 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 SP6Q3SY56 376 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 MCFD2Q8NI22 146 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 SOSTQ9BQB4 213 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 NEURL2Q9BR09 285 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 TUBA4BQ9H853 241 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 MRPL27Q9P0M9 148 aaKnown RBP12.76□□□□□ -0.37
HOXD8-204ENST00000544999 MLXQ9UH92 298 aa12.76□□□□□ -0.37
HOXD8-204ENST00000544999 IGHV3-35A0A0C4DH35 117 aa12.75□□□□□ -0.37
HOXD8-204ENST00000544999 ANKRD20A5PA0PJZ0 165 aa12.75□□□□□ -0.37
HOXD8-204ENST00000544999 F8W735 103 aaPredicted RBP12.75□□□□□ -0.37
HOXD8-204ENST00000544999 TNFSF8P32971 234 aa12.75□□□□□ -0.37
HOXD8-204ENST00000544999 GUCA2BQ16661 112 aa12.75□□□□□ -0.37
HOXD8-204ENST00000544999 TM4SF20Q53R12 229 aa12.75□□□□□ -0.37
HOXD8-204ENST00000544999 WDR89Q96FK6 387 aaPredicted RBP12.75□□□□□ -0.37
HOXD8-204ENST00000544999 PRRT1Q99946 306 aa12.75□□□□□ -0.37
HOXD8-204ENST00000544999 RTBDNQ9BSG5 229 aaPredicted RBP12.75□□□□□ -0.37
HOXD8-204ENST00000544999 GAR1Q9NY12 217 aaKnown RBP12.75□□□□□ -0.37
HOXD8-204ENST00000544999 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
HOXD8-204ENST00000544999 A0A0B4J293 547 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 FABP12A6NFH5 140 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 INS-IGF2F8WCM5 200 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 I3L2K1 104 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 NDUFA4O00483 81 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 CD7P09564 240 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 Q56UQ5 140 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 TMEM61Q8N0U2 210 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 UBAC2Q8NBM4 344 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 RRNAD1Q96FB5 475 aaKnown RBP12.74□□□□□ -0.37
HOXD8-204ENST00000544999 MISP3Q96FF7 219 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 CHRDL1Q9BU40 450 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 NAA60Q9H7X0 242 aa12.74□□□□□ -0.37
HOXD8-204ENST00000544999 HUWE1Q7Z6Z7 4374 aaKnown RBP12.74□□□□□ -0.37
HOXD8-204ENST00000544999 TRAV25A0A0B4J276 109 aa12.73□□□□□ -0.37
HOXD8-204ENST00000544999 TEX13DA0A0J9YY54 714 aaPredicted RBP12.73□□□□□ -0.37
HOXD8-204ENST00000544999 CDS2O95674 445 aa12.73□□□□□ -0.37
HOXD8-204ENST00000544999 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms