RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
VAMP1-208ENST00000544432 HINT2Q9BX68 163 aa10.53□□□□□ -0.72
VAMP1-208ENST00000544432 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
VAMP1-208ENST00000544432 NXF2Q9GZY0 626 aaKnown RBP10.53□□□□□ -0.72
VAMP1-208ENST00000544432 PALMDQ9NP74 551 aa10.53□□□□□ -0.72
VAMP1-208ENST00000544432 ZC4H2Q9NQZ6 224 aa10.53□□□□□ -0.72
VAMP1-208ENST00000544432 COPZ2Q9P299 210 aa10.53□□□□□ -0.72
VAMP1-208ENST00000544432 RSL24D1Q9UHA3 163 aaKnown RBP10.53□□□□□ -0.72
VAMP1-208ENST00000544432 TMEM213A2RRL7 107 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 CBLN1P23435 193 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 ELLP55199 621 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-208ENST00000544432 PRCDQ00LT1 54 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 IL18Q14116 193 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 SCGB2B2Q4G0G5 96 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 SPSB3Q6PJ21 355 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 PLET1Q6UQ28 207 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 OR2C3Q8N628 320 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 ZNF114Q8NC26 417 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 OR13C8Q8NGS7 320 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 DYNLRB2Q8TF09 96 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 MARC2Q969Z3 335 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-208ENST00000544432 CEPT1Q9Y6K0 416 aa10.52□□□□□ -0.73
VAMP1-208ENST00000544432 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 DISC1C4P0D8 188 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 INS-IGF2F8WCM5 200 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 K7EIM0 57 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 TGOLN2O43493 480 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 AKAIN1P0CW23 69 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 C8orf88P0DMB2 117 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 UCP1P25874 307 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 GPR183P32249 361 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 TNFSF8P32971 234 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 PPP5CP53041 499 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 MARCH1Q8TCQ1 289 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 SCARB1Q8WTV0 552 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 C6orf62Q9GZU0 229 aaPredicted RBP10.51□□□□□ -0.73
VAMP1-208ENST00000544432 GAR1Q9NY12 217 aaKnown RBP10.51□□□□□ -0.73
VAMP1-208ENST00000544432 C21orf62Q9NYP8 219 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 UFC1Q9Y3C8 167 aa10.51□□□□□ -0.73
VAMP1-208ENST00000544432 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 FCGR2BP31994 310 aaPredicted RBP10.5□□□□□ -0.73
VAMP1-208ENST00000544432 ERHP84090 104 aaKnown RBP10.5□□□□□ -0.73
VAMP1-208ENST00000544432 UXS1Q8NBZ7 420 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 OR4C16Q8NGL9 310 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 PRRT1Q99946 306 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 TM2D3Q9BRN9 247 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 RTBDNQ9BSG5 229 aaPredicted RBP10.5□□□□□ -0.73
VAMP1-208ENST00000544432 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 SLC2A8Q9NY64 477 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 GPR132Q9UNW8 380 aa10.5□□□□□ -0.73
VAMP1-208ENST00000544432 C14orf166Q9Y224 244 aaKnown RBP10.5□□□□□ -0.73
VAMP1-208ENST00000544432 A0A0B4J293 547 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 FABP12A6NFH5 140 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
VAMP1-208ENST00000544432 CDS2O95674 445 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 TRIM16LQ309B1 348 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 ZNF57Q68EA5 555 aaPredicted RBP10.49□□□□□ -0.73
VAMP1-208ENST00000544432 UNQ9165/PRO28630Q6UXU0 137 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 FAM219AQ8IW50 185 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 MCFD2Q8NI22 146 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 TXN2Q99757 166 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 TMEM222Q9H0R3 208 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 PLEKHA3Q9HB20 300 aa10.49□□□□□ -0.73
VAMP1-208ENST00000544432 MRPL27Q9P0M9 148 aaKnown RBP10.49□□□□□ -0.73
VAMP1-208ENST00000544432 TRAV25A0A0B4J276 109 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 OR2T8A6NH00 312 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 I3L2K1 104 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 K7EMT4 169 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 NDUFA4O00483 81 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 EDN2P20800 178 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 AKR1C2P52895 323 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 DHODHQ02127 395 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 SP6Q3SY56 376 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 AARDQ4LEZ3 155 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 FAAP20Q6NZ36 180 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 GLYATL2Q8WU03 294 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 TMEM190Q8WZ59 177 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 RRNAD1Q96FB5 475 aaKnown RBP10.48□□□□□ -0.73
VAMP1-208ENST00000544432 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 NEURL2Q9BR09 285 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 C5orf66Q9H5L9 145 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 TUBA4BQ9H853 241 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 MLXQ9UH92 298 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 SCP2D1Q9UJQ7 156 aa10.48□□□□□ -0.73
VAMP1-208ENST00000544432 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
VAMP1-208ENST00000544432 ZNF701M0R085 212 aaPredicted RBP10.47□□□□□ -0.73
VAMP1-208ENST00000544432 ST8SIA3O43173 380 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 CTSGP08311 255 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 ADMP35318 185 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 MFAP4P55083 255 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 CD81P60033 236 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 IZUMO4Q1ZYL8 232 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 PVRIGQ6DKI7 326 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 LINC00322Q6ZN03 302 aaPredicted RBP10.47□□□□□ -0.73
VAMP1-208ENST00000544432 OR51S1Q8NGJ8 323 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms