RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 MFAP2P55001 183 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 SRPXP78539 464 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 ATP5G2Q06055 141 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 PPP1R1AQ13522 171 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 OR2C3Q8N628 320 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 ZNF114Q8NC26 417 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 DPF1Q92782 380 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 GPR146Q96CH1 333 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 MCRIP2Q9BUT9 160 aaKnown RBP14.7□□□□□ -0.06
DDX55-211ENST00000544429 WDR12Q9GZL7 423 aaKnown RBP14.7□□□□□ -0.06
DDX55-211ENST00000544429 PEF1Q9UBV8 284 aaKnown RBP14.7□□□□□ -0.06
DDX55-211ENST00000544429 SHPKQ9UHJ6 478 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 FBXL7Q9UJT9 491 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 SFT2D2O95562 160 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 ANXA3P12429 323 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 SLURP1P55000 103 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 EXOSC2Q13868 293 aaKnown RBP14.69□□□□□ -0.06
DDX55-211ENST00000544429 ZNF846Q147U1 533 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 ANKRD55Q3KP44 614 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 C1QL4Q86Z23 238 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 LGI3Q8N145 548 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 OR52E5Q8NH55 327 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 DCUN1D4Q92564 292 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 DLX4Q92988 240 aaPredicted RBP14.69□□□□□ -0.06
DDX55-211ENST00000544429 CCDC140Q96MF4 163 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 HINT2Q9BX68 163 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 TBC1D24Q9ULP9 559 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 FLVCR2Q9UPI3 526 aa14.69□□□□□ -0.06
DDX55-211ENST00000544429 DEFA4P12838 97 aa14.68□□□□□ -0.06
DDX55-211ENST00000544429 HOXD3P31249 432 aaPredicted RBP14.68□□□□□ -0.06
DDX55-211ENST00000544429 FAM209BQ5JX69 171 aa14.68□□□□□ -0.06
DDX55-211ENST00000544429 PVRIGQ6DKI7 326 aa14.68□□□□□ -0.06
DDX55-211ENST00000544429 LYZL2Q7Z4W2 148 aa14.68□□□□□ -0.06
DDX55-211ENST00000544429 OR1P1Q8NH06 330 aa14.68□□□□□ -0.06
DDX55-211ENST00000544429 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.68□□□□□ -0.06
DDX55-211ENST00000544429 DUXBA0A1W2PPF3 345 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 ANKRD34BA5PLL1 514 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 BMPR1BO00238 502 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 UPK1BO75841 260 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 ZP3P21754 424 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 RAB25P57735 213 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 EGFEM1PQ0D2K5 195 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 KLF5Q13887 457 aaPredicted RBP14.67□□□□□ -0.06
DDX55-211ENST00000544429 OR1L6Q8NGR2 347 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 RNASE11Q8TAA1 199 aaKnown RBP14.67□□□□□ -0.06
DDX55-211ENST00000544429 CACNG5Q9UF02 275 aa14.67□□□□□ -0.06
DDX55-211ENST00000544429 PIGBOS1A0A0B4J2F0 54 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 C9orf170A2RU37 121 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 MFSD2BA6NFX1 497 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 VAMP1P23763 118 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 IFITM3Q01628 133 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 ASAH1Q13510 395 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 BSXQ3C1V8 233 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 VN1R17PQ8TDU5 208 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 CXorf58Q96LI9 332 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 GPR61Q9BZJ8 451 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 PLEKHA3Q9HB20 300 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 THYN1Q9P016 225 aa14.66□□□□□ -0.06
DDX55-211ENST00000544429 TRBV7-1A0A0A6YYK4 115 aa14.65□□□□□ -0.06
DDX55-211ENST00000544429 K7EIM0 57 aa14.65□□□□□ -0.06
DDX55-211ENST00000544429 OVOL1O14753 267 aa14.65□□□□□ -0.06
DDX55-211ENST00000544429 IFNA17P01571 189 aa14.65□□□□□ -0.06
DDX55-211ENST00000544429 SPCS3P61009 180 aa14.65□□□□□ -0.06
DDX55-211ENST00000544429 ZNF502Q8TBZ5 544 aa14.65□□□□□ -0.06
DDX55-211ENST00000544429 EEF1AKMT3Q96AZ1 226 aa14.65□□□□□ -0.06
DDX55-211ENST00000544429 CYB5BO43169 146 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 PITX3O75364 302 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 TCRBP04435 133 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 OR4E1P0C645 316 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 SULT1A3P0DMM9 295 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 SULT1A4P0DMN0 295 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 MECP2P51608 486 aaKnown RBP14.64□□□□□ -0.07
DDX55-211ENST00000544429 DHRS2Q13268 280 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 SPINK9Q5DT21 86 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 ACSM6Q6P461 480 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 ATP6V0BQ99437 205 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 C20orf85Q9H1P6 137 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 CACFD1Q9UGQ2 172 aa14.64□□□□□ -0.07
DDX55-211ENST00000544429 A0A1B0GU03 582 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 SEC14L6B5MCN3 397 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 F8W735 103 aaPredicted RBP14.63□□□□□ -0.07
DDX55-211ENST00000544429 SLC25A6P12236 298 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 ANXA7P20073 488 aaKnown RBP14.63□□□□□ -0.07
DDX55-211ENST00000544429 ERHP84090 104 aaKnown RBP14.63□□□□□ -0.07
DDX55-211ENST00000544429 DEFA6Q01524 100 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 SMCO1Q147U7 214 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 C9orf66Q5T8R8 295 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 SLC25A24Q6NUK1 477 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 LYG2Q86SG7 212 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 PDCD10Q9BUL8 212 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 HSPB7Q9UBY9 170 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 TMED3Q9Y3Q3 217 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 S4R3C0 116 aa14.63□□□□□ -0.07
DDX55-211ENST00000544429 PRKDCP78527 4128 aaKnown RBP14.63□□□□□ -0.07
DDX55-211ENST00000544429 PPP5D1E7EU14 171 aa14.62□□□□□ -0.07
DDX55-211ENST00000544429 I3L2K1 104 aa14.62□□□□□ -0.07
DDX55-211ENST00000544429 IGHV3-23P01764 117 aa14.62□□□□□ -0.07
DDX55-211ENST00000544429 HLA-AP01891 365 aaKnown RBP14.62□□□□□ -0.07
DDX55-211ENST00000544429 RNASE2P10153 161 aaKnown RBP14.62□□□□□ -0.07
DDX55-211ENST00000544429 INSL3P51460 131 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms