RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 PRSS46E5RG02 174 aa24.17■■□□□ 1.46
CCM2-219ENST00000544363 IFNA5P01569 189 aa24.17■■□□□ 1.46
CCM2-219ENST00000544363 DEFB112Q30KQ8 113 aa24.17■■□□□ 1.46
CCM2-219ENST00000544363 SLC25A33Q9BSK2 321 aa24.17■■□□□ 1.46
CCM2-219ENST00000544363 TMEM147Q9BVK8 224 aa24.17■■□□□ 1.46
CCM2-219ENST00000544363 H3BUX3 64 aa24.16■■□□□ 1.46
CCM2-219ENST00000544363 CX3CL1P78423 397 aa24.16■■□□□ 1.46
CCM2-219ENST00000544363 HSD17B13Q7Z5P4 300 aaPredicted RBP24.16■■□□□ 1.46
CCM2-219ENST00000544363 MDFIC2A0A1B0GVS7 189 aa24.15■■□□□ 1.46
CCM2-219ENST00000544363 HLA-DRB1P01911 266 aa24.15■■□□□ 1.46
CCM2-219ENST00000544363 TUSC1Q2TAM9 212 aa24.15■■□□□ 1.46
CCM2-219ENST00000544363 EIF5AL1Q6IS14 154 aaKnown RBP24.15■■□□□ 1.46
CCM2-219ENST00000544363 TMEM219Q86XT9 240 aa24.15■■□□□ 1.46
CCM2-219ENST00000544363 HSD17B11Q8NBQ5 300 aa24.15■■□□□ 1.46
CCM2-219ENST00000544363 TMED6Q8WW62 240 aa24.15■■□□□ 1.46
CCM2-219ENST00000544363 SSMEM1Q8WWF3 244 aa24.15■■□□□ 1.46
CCM2-219ENST00000544363 SUB1P53999 127 aaKnown RBP eCLIP24.14■■□□□ 1.46
CCM2-219ENST00000544363 KRTAP1-1Q07627 177 aa24.14■■□□□ 1.46
CCM2-219ENST00000544363 TEX29Q8N6K0 151 aa24.14■■□□□ 1.46
CCM2-219ENST00000544363 C22orf15Q8WYQ4 148 aa24.14■■□□□ 1.46
CCM2-219ENST00000544363 GGACTQ9BVM4 153 aa24.14■■□□□ 1.46
CCM2-219ENST00000544363 UQCC1Q9NVA1 299 aa24.14■■□□□ 1.46
CCM2-219ENST00000544363 MOB4Q9Y3A3 225 aa24.14■■□□□ 1.46
CCM2-219ENST00000544363 A6NDX4 124 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 CD5LO43866 347 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 REG1AP05451 166 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 AREGP15514 252 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 VWC2Q2TAL6 325 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 SLC25A24Q6NUK1 477 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 P2RX4Q99571 388 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 FBXO24O75426 580 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 APELAP0DMC3 54 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 DLK1P80370 383 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 C5orf56Q8N8D9 126 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 ZNF114Q8NC26 417 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 ARPC1AQ92747 370 aa24.13■■□□□ 1.45
CCM2-219ENST00000544363 PARD6GQ9BYG4 376 aaPredicted RBP24.13■■□□□ 1.45
CCM2-219ENST00000544363 IGHV7-81A0A0B4J1V7 117 aa24.12■■□□□ 1.45
CCM2-219ENST00000544363 FGF16O43320 207 aa24.12■■□□□ 1.45
CCM2-219ENST00000544363 SCGB1C1Q8TD33 95 aa24.12■■□□□ 1.45
CCM2-219ENST00000544363 ABHD5Q8WTS1 349 aa24.12■■□□□ 1.45
CCM2-219ENST00000544363 PITPNC1Q9UKF7 332 aa24.12■■□□□ 1.45
CCM2-219ENST00000544363 UBE2L5PA0A1B0GUS4 154 aa24.11■■□□□ 1.45
CCM2-219ENST00000544363 SPP1P10451 314 aa24.11■■□□□ 1.45
CCM2-219ENST00000544363 ATP6V0CP27449 155 aa24.11■■□□□ 1.45
CCM2-219ENST00000544363 LY6EQ16553 131 aa24.11■■□□□ 1.45
CCM2-219ENST00000544363 FAM74A1Q5RGS3 127 aa24.11■■□□□ 1.45
CCM2-219ENST00000544363 SEC11BP0C7V7 166 aa24.1■■□□□ 1.45
CCM2-219ENST00000544363 NDPQ00604 133 aa24.1■■□□□ 1.45
CCM2-219ENST00000544363 FAM103A1Q9BTL3 118 aaKnown RBP24.1■■□□□ 1.45
CCM2-219ENST00000544363 WDR61Q9GZS3 305 aaKnown RBP24.1■■□□□ 1.45
CCM2-219ENST00000544363 SLC25A32Q9H2D1 315 aa24.1■■□□□ 1.45
CCM2-219ENST00000544363 TEX15Q9BXT5 2789 aa24.1■■□□□ 1.45
CCM2-219ENST00000544363 GNPNAT1Q96EK6 184 aaPredicted RBP24.1■■□□□ 1.45
CCM2-219ENST00000544363 SH3BGRL3Q9H299 93 aa24.1■■□□□ 1.45
CCM2-219ENST00000544363 HSPB9Q9BQS6 159 aa24.09■■□□□ 1.45
CCM2-219ENST00000544363 FLNAP21333 2647 aaKnown RBP24.09■■□□□ 1.45
CCM2-219ENST00000544363 NAV3Q8IVL0 2385 aa24.08■■□□□ 1.45
CCM2-219ENST00000544363 RAB14P61106 215 aa24.08■■□□□ 1.45
CCM2-219ENST00000544363 RUNX1Q01196 453 aa24.08■■□□□ 1.45
CCM2-219ENST00000544363 PVRIGQ6DKI7 326 aa24.08■■□□□ 1.45
CCM2-219ENST00000544363 OR1P1Q8NH06 330 aa24.08■■□□□ 1.45
CCM2-219ENST00000544363 RNASEH2CQ8TDP1 164 aaKnown RBP24.08■■□□□ 1.45
CCM2-219ENST00000544363 F11RQ9Y624 299 aaKnown RBP24.08■■□□□ 1.45
CCM2-219ENST00000544363 IER3P46695 156 aa24.07■■□□□ 1.44
CCM2-219ENST00000544363 TAF15Q92804 592 aaKnown RBP eCLIP24.07■■□□□ 1.44
CCM2-219ENST00000544363 RPS10-NUDT3A0A1W2PQS6 291 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 AMY1AP04745 511 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 MDKP21741 143 aaPredicted RBP24.06■■□□□ 1.44
CCM2-219ENST00000544363 ARSJQ5FYB0 599 aaPredicted RBP24.06■■□□□ 1.44
CCM2-219ENST00000544363 CLLU1Q5K131 121 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 C16orf82Q7Z2V1 217 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 SMCO3A2RU48 225 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 FNDC10F2Z333 226 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 IGHV4-59P01825 116 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 EGR2P11161 476 aaPredicted RBP24.06■■□□□ 1.44
CCM2-219ENST00000544363 CTRB1P17538 263 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 CTRB2Q6GPI1 263 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 PCNPQ8WW12 178 aaKnown RBP24.06■■□□□ 1.44
CCM2-219ENST00000544363 PLA2G2EQ9NZK7 142 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 FBXO7Q9Y3I1 522 aa24.06■■□□□ 1.44
CCM2-219ENST00000544363 M0QZK8 103 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 FGF7P21781 194 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 MFAP2P55001 183 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 CD69Q07108 199 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 ASPHD1Q5U4P2 390 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 Q6YL49 198 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 SPNS3Q6ZMD2 512 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 C19orf35Q6ZS72 473 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 OR2G3Q8NGZ4 309 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 ZNF48Q96MX3 618 aaPredicted RBP24.05■■□□□ 1.44
CCM2-219ENST00000544363 PRDM13Q9H4Q3 707 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 NPVFQ9HCQ7 196 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 YAE1D1Q9NRH1 226 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 WDR83OSQ9Y284 106 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 RFNGQ9Y644 331 aa24.05■■□□□ 1.44
CCM2-219ENST00000544363 SH2D7A6NKC9 451 aaPredicted RBP24.04■■□□□ 1.44
CCM2-219ENST00000544363 FAM157CP0CG43 387 aa24.04■■□□□ 1.44
CCM2-219ENST00000544363 GPX4P36969 197 aaPredicted RBP24.04■■□□□ 1.44
CCM2-219ENST00000544363 OR5R1Q8NH85 324 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms