RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MMDQ15546 238 aa10.96□□□□□ -0.66
HCFC2-202ENST00000544223 TMEM88Q6PEY1 159 aa10.96□□□□□ -0.66
HCFC2-202ENST00000544223 SUN5Q8TC36 379 aa10.96□□□□□ -0.66
HCFC2-202ENST00000544223 TBX15Q96SF7 602 aa10.96□□□□□ -0.66
HCFC2-202ENST00000544223 MRPL36Q9P0J6 103 aaKnown RBP10.96□□□□□ -0.66
HCFC2-202ENST00000544223 DPM3Q9P2X0 92 aa10.96□□□□□ -0.66
HCFC2-202ENST00000544223 UMAD1C9J7I0 102 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 VENTXO95231 258 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 RNASE2P10153 161 aaKnown RBP10.95□□□□□ -0.66
HCFC2-202ENST00000544223 MC5RP33032 325 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 RAB5CP51148 216 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 FAM120AOSQ5T036 256 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 OR11H6Q8NGC7 330 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 TMEM167AQ8TBQ9 72 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 RXFP4Q8TDU9 374 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 SIRPDQ9H106 197 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 SIGLEC9Q9Y336 463 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 ITPR3Q14573 2671 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 IGHV2-70DA0A0C4DH43 119 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-202ENST00000544223 USF1P22415 310 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-202ENST00000544223 NPBWR1P48145 328 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 OR10G4Q8NGN3 311 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 OR10G9Q8NGN4 311 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 OR10G7Q8NGN6 311 aa10.95□□□□□ -0.66
HCFC2-202ENST00000544223 FAM74A7A6NL05 159 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 ODF3BA8MYP8 253 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 SNRNP70P08621 437 aaKnown RBP10.94□□□□□ -0.66
HCFC2-202ENST00000544223 MDKP21741 143 aaPredicted RBP10.94□□□□□ -0.66
HCFC2-202ENST00000544223 PDLIM4P50479 330 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 DVL1P1P54792 670 aaPredicted RBP10.94□□□□□ -0.66
HCFC2-202ENST00000544223 MFAP2P55001 183 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 RAB11AP62491 216 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 VMA21Q3ZAQ7 101 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 FAM74A3Q4VXF1 159 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 FAM71F2Q6NXP2 309 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 BRD3OSQ6XYD6 125 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 OR1L8Q8NGR8 309 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 CFHR4Q92496 578 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 MARVELD3Q96A59 401 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 ACY3Q96HD9 319 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 WDR83OSQ9Y284 106 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 ZNF257Q9Y2Q1 563 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 M0R1W7 72 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 YIF1AO95070 293 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 RBP4P02753 201 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 PRSS8Q16651 343 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 TMEM41BQ5BJD5 291 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 ZNF787Q6DD87 383 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 ZNF709Q8N972 641 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 OR5B3Q8NH48 314 aa10.94□□□□□ -0.66
HCFC2-202ENST00000544223 GSX1Q9H4S2 264 aaPredicted RBP10.94□□□□□ -0.66
HCFC2-202ENST00000544223 FNDC4Q9H6D8 234 aaPredicted RBP10.94□□□□□ -0.66
HCFC2-202ENST00000544223 NF1P21359 2839 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 GAMTQ14353 236 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 UQCC3Q6UW78 93 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 PPP1R27Q86WC6 154 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 P2RX4Q99571 388 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 PSMG3Q9BT73 122 aaPredicted RBP10.93□□□□□ -0.66
HCFC2-202ENST00000544223 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
HCFC2-202ENST00000544223 MAP1LC3B2A6NCE7 125 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 RBFOX3A6NFN3 312 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 NCBP2LA6PVI3 153 aaKnown RBP10.93□□□□□ -0.66
HCFC2-202ENST00000544223 ACTL6BO94805 426 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 SNRPCP09234 159 aaKnown RBP10.93□□□□□ -0.66
HCFC2-202ENST00000544223 RPP30P78346 268 aaKnown RBP10.93□□□□□ -0.66
HCFC2-202ENST00000544223 ATP6V1FQ16864 119 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 KLF17Q5JT82 389 aaPredicted RBP10.93□□□□□ -0.66
HCFC2-202ENST00000544223 C10orf105Q8TEF2 133 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 MAP1LC3BQ9GZQ8 125 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 S4R3C0 116 aa10.93□□□□□ -0.66
HCFC2-202ENST00000544223 FASNP49327 2511 aaKnown RBP10.92□□□□□ -0.66
HCFC2-202ENST00000544223 CREBBPQ92793 2442 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 CRYGBP07316 175 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 COX6B1P14854 86 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 SAA4P35542 130 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 KIAA0141Q14154 515 aaPredicted RBP10.92□□□□□ -0.66
HCFC2-202ENST00000544223 CBLN2Q8IUK8 224 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 RAB24Q969Q5 203 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 AJUBAQ96IF1 538 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 EAF1Q96JC9 268 aaPredicted RBP10.92□□□□□ -0.66
HCFC2-202ENST00000544223 SPOCK3Q9BQ16 436 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 SLC39A9Q9NUM3 307 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 AMMECR1Q9Y4X0 333 aaPredicted RBP10.92□□□□□ -0.66
HCFC2-202ENST00000544223 PXMP4Q9Y6I8 212 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 FLNAP21333 2647 aaKnown RBP10.92□□□□□ -0.66
HCFC2-202ENST00000544223 IGLC7A0M8Q6 106 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 LGALS7P47929 136 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 ICAM4Q14773 271 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 VSTM2AQ8TAG5 236 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 MISP3Q96FF7 219 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 FKBP11Q9NYL4 201 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 DMRT1Q9Y5R6 373 aa10.92□□□□□ -0.66
HCFC2-202ENST00000544223 KLF2Q9Y5W3 355 aaPredicted RBP10.92□□□□□ -0.66
HCFC2-202ENST00000544223 AKAP9Q99996 3911 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 OPRK1P41145 380 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms