RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MAS1LP35410 378 aa13.81□□□□□ -0.2
PTPRO-209ENST00000543886 BEND2Q8NDZ0 799 aa13.81□□□□□ -0.2
PTPRO-209ENST00000543886 AMMECR1Q9Y4X0 333 aaPredicted RBP13.81□□□□□ -0.2
PTPRO-209ENST00000543886 IGHV3-72A0A0B4J1Y9 119 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 SLC25A17O43808 307 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 RNASE2P10153 161 aaKnown RBP13.8□□□□□ -0.2
PTPRO-209ENST00000543886 LGALS7P47929 136 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 UQCRFS1P47985 274 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 CD81P60033 236 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 PRB3Q04118 309 aaPredicted RBP13.8□□□□□ -0.2
PTPRO-209ENST00000543886 BSXQ3C1V8 233 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 DTX2Q86UW9 622 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 C1QL4Q86Z23 238 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 FAM24BQ8N5W8 94 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 C1orf159Q96HA4 380 aa13.8□□□□□ -0.2
PTPRO-209ENST00000543886 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
PTPRO-209ENST00000543886 BUB1B-PAK6H3BSN5 160 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 OR2C1O95371 312 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 GNLYP22749 145 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 STPG3Q8N7X2 389 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 ITLN2Q8WWU7 325 aaPredicted RBP13.79□□□□□ -0.2
PTPRO-209ENST00000543886 CHODLQ9H9P2 273 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 A0A087WWC5 75 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 INS-IGF2F8WCM5 200 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
PTPRO-209ENST00000543886 MOB3BQ86TA1 216 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 LY6G5BQ8NDX9 201 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 GATAD1Q8WUU5 269 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 INSIG2Q9Y5U4 225 aa13.79□□□□□ -0.2
PTPRO-209ENST00000543886 TMEM8BA6NDV4 472 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 ZNF727A8MUV8 499 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 C22orf46C9J442 243 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 IGFBP2P18065 325 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 RPL29P47914 159 aaKnown RBP13.78□□□□□ -0.2
PTPRO-209ENST00000543886 TMEM249Q2WGJ8 235 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 OR4F5Q8NH21 305 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 RPEQ96AT9 228 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 OR4F4Q96R69 305 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 IGHV1-3A0A0C4DH29 117 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 B4DEV8 164 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 TMEM250H0YL14 139 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 PAGE4O60829 102 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 TMEM144Q7Z5S9 345 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 PNKDQ8N490 385 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 RITA1Q96K30 269 aa13.78□□□□□ -0.2
PTPRO-209ENST00000543886 SSBP3Q9BWW4 388 aaPredicted RBP13.78□□□□□ -0.2
PTPRO-209ENST00000543886 CLN5O75503 358 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 C10orf55Q5SWW7 151 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 TEX45Q8NA69 505 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 OR4P4Q8NGL7 312 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 UBTD1Q9HAC8 227 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 TPSG1Q9NRR2 321 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 ABCA4P78363 2273 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 MALRD1Q5VYJ5 2156 aa13.77□□□□□ -0.21
PTPRO-209ENST00000543886 E7EUB6 86 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 NDUFS6O75380 124 aaKnown RBP13.76□□□□□ -0.21
PTPRO-209ENST00000543886 CXorf1O96002 111 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 SUB1P53999 127 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTPRO-209ENST00000543886 RHOBP62745 196 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 CD69Q07108 199 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 ZNF674Q2M3X9 581 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 FAM209BQ5JX69 171 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 SMIM7Q9BQ49 75 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 TNCP24821 2201 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 ARL14EPLP0DKL9 152 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 GAMTQ14353 236 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
PTPRO-209ENST00000543886 RPUSD4Q96CM3 377 aaKnown RBP13.76□□□□□ -0.21
PTPRO-209ENST00000543886 SDF2L1Q9HCN8 221 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
PTPRO-209ENST00000543886 LOC105371242A0A075B767 164 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 TRAV20A0A0B4J274 112 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 A0A1W2PPR1 153 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 CGB1A6NKQ9 187 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 C11orf94C9JXX5 98 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 STAG3L2P0CL84 134 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 STAG3L3P0CL85 134 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 PRR20EP86478 221 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 PRR20CP86479 221 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 PRR20DP86480 221 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 PRR20BP86481 221 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 PRR20AP86496 221 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 WT1-ASQ06250 92 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 ABHD5Q8WTS1 349 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 CACNG8Q8WXS5 425 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 SLC35E1Q96K37 410 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 NAT8Q9UHE5 227 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 ACTL6BO94805 426 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 GPX4P36969 197 aaPredicted RBP13.75□□□□□ -0.21
PTPRO-209ENST00000543886 CDKN1AP38936 164 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 MMD2Q8IY49 270 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 SLC45A2Q9UMX9 530 aa13.75□□□□□ -0.21
PTPRO-209ENST00000543886 M0R1W7 72 aa13.74□□□□□ -0.21
PTPRO-209ENST00000543886 GPR6P46095 362 aaPredicted RBP13.74□□□□□ -0.21
PTPRO-209ENST00000543886 UBE2G2P60604 165 aa13.74□□□□□ -0.21
PTPRO-209ENST00000543886 ARF6P62330 175 aa13.74□□□□□ -0.21
PTPRO-209ENST00000543886 PRSS8Q16651 343 aa13.74□□□□□ -0.21
PTPRO-209ENST00000543886 CST9LP1Q5W188 147 aa13.74□□□□□ -0.21
PTPRO-209ENST00000543886 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms