RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FOXH1O75593 365 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 PSG5Q15238 335 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 CT45A1Q5HYN5 189 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 BHLHA15Q7RTS1 189 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-208ENST00000543633 OR8I2Q8N0Y5 310 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 SIGLECL1Q8N7X8 197 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 OR1L8Q8NGR8 309 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 CT45A3Q8NHU0 189 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 TMEM68Q96MH6 324 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF71Q9NQZ8 489 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-208ENST00000543633 PPP1R14DQ9NXH3 145 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 DKK4Q9UBT3 224 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 SLC25A15Q9Y619 301 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 TANC2Q9HCD6 1990 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 UPK2O00526 184 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 AMY1AP04745 511 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 GATA4P43694 442 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 COMPP49747 757 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-208ENST00000543633 MRPS11P82912 194 aaKnown RBP11.25□□□□□ -0.61
VPS33A-208ENST00000543633 IGFL2Q6UWQ7 119 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF705AQ6ZN79 300 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-208ENST00000543633 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 KCNS1Q96KK3 526 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 COMMD5Q9GZQ3 224 aa11.25□□□□□ -0.61
VPS33A-208ENST00000543633 DSCAML1Q8TD84 2053 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 CELSR3Q9NYQ7 3312 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 GPX1P07203 203 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 CACNA1DQ01668 2161 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 TMPRSS7Q7RTY8 843 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 OR5B3Q8NH48 314 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 PROCRQ9UNN8 238 aa11.24□□□□□ -0.61
VPS33A-208ENST00000543633 SMIM27A0A1W2PRY6 76 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 AHRRA9YTQ3 701 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 PPOXP50336 477 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 ATP1A1-AS1Q5TC04 95 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 C1orf229Q6ZS94 237 aaPredicted RBP11.23□□□□□ -0.61
VPS33A-208ENST00000543633 ST6GALNAC3Q8NDV1 305 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 WIPF2Q8TF74 440 aaPredicted RBP11.23□□□□□ -0.61
VPS33A-208ENST00000543633 PLPPR2Q96GM1 343 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 BET1LQ9NYM9 111 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 NAT8BQ9UHF3 227 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
VPS33A-208ENST00000543633 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 J3QR06 171 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 CRYBB3P26998 211 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 CDKN1AP38936 164 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 ZNRF1Q8ND25 227 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF503Q96F45 646 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF714Q96N38 554 aa11.23□□□□□ -0.61
VPS33A-208ENST00000543633 ASPMQ8IZT6 3477 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 IGHV3OR15-7A0A075B7D8 119 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 TRAV17A0A0B4J275 112 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 DLEU1O43261 78 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 C8orf88P0DMB2 117 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 KLF3P57682 345 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-208ENST00000543633 OR5I1Q13606 314 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 MOGAT3Q86VF5 341 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 VN1R17PQ8TDU5 208 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
VPS33A-208ENST00000543633 FBXL7Q9UJT9 491 aa11.22□□□□□ -0.61
VPS33A-208ENST00000543633 IGLV3-9A0A075B6K5 115 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 IZUMO1RA6ND01 250 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 GGTLC3B5MD39 225 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF253O75346 499 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 ZNF25P17030 456 aaPredicted RBP11.21□□□□□ -0.61
VPS33A-208ENST00000543633 GLRXP35754 106 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 STUMQ69YW2 141 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 SLC25A48Q6ZT89 311 aaKnown RBP11.21□□□□□ -0.61
VPS33A-208ENST00000543633 FAM231DQ6ZW35 169 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 Q8N976 141 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 ASCL3Q9NQ33 180 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 CDC42EP3Q9UKI2 254 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 FAM186AA6NE01 2351 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 DCHS1Q96JQ0 3298 aa11.21□□□□□ -0.61
VPS33A-208ENST00000543633 OR7C2O60412 319 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 ACTL6BO94805 426 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 LINC00614P0C842 121 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 RNASE2P10153 161 aaKnown RBP11.21□□□□□ -0.62
VPS33A-208ENST00000543633 CTRLP40313 264 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 CD69Q07108 199 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 MSMPQ1L6U9 139 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 IBA57Q5T440 356 aaKnown RBP11.21□□□□□ -0.62
VPS33A-208ENST00000543633 LYG1Q8N1E2 194 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 STARD4Q96DR4 205 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 SLC25A33Q9BSK2 321 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 SLC35D1Q9NTN3 355 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 RNF7Q9UBF6 113 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 PAM16Q9Y3D7 125 aa11.21□□□□□ -0.62
VPS33A-208ENST00000543633 TBL2Q9Y4P3 447 aaKnown RBP11.21□□□□□ -0.62
VPS33A-208ENST00000543633 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
VPS33A-208ENST00000543633 ZNF324O75467 553 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-208ENST00000543633 IRF2P14316 349 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms