RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 C12orf73Q69YU5 71 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 FAM71E1Q6IPT2 247 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM205Q6UW68 189 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 LYG2Q86SG7 212 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 H1FOOQ8IZA3 346 aaPredicted RBP2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 HIST3H2BBQ8N257 126 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF664Q8N3J9 261 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF485Q8NCK3 441 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 LINC01006Q8NI28 216 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 NUP205Q92621 2012 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 CPNE2Q96FN4 548 aaPredicted RBP2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 CAMK2N2Q96S95 79 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 FAAP24Q9BTP7 215 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TSSK6Q9BXA6 273 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TBL1XR1Q9BZK7 514 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 ABCG5Q9H222 651 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 NOX3Q9HBY0 568 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC7A10Q9NS82 523 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 PRG3Q9Y2Y8 225 aaPredicted RBP2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TET1Q8NFU7 2136 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 KIAA1671Q9BY89 1806 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 PATJQ8NI35 1801 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 IGLV1-50A0A075B6I6 118 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 IGKV6D-21A0A0A0MT36 114 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 IGHV5-51A0A0C4DH38 117 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 TRDV1A0A1B0GX56 115 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 A0A1B0GXF2 115 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 A6NDX4 124 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 CEACAM18A8MTB9 384 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 J3QKU1 62 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 K7ERU9 68 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 EEF1E1O43324 174 aaKnown RBP2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 SSNA1O43805 119 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 YIF1AO95070 293 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 TNFSF15O95150 251 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 GAS8-AS1O95177 125 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 SOD1P00441 154 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 PMP2P02689 132 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 MT-ND4P03905 459 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OPN1SWP03999 348 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 UCHL1P09936 223 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OR12D1P0DN82 309 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 CELP19835 753 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 GZMHP20718 246 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 NFYBP25208 207 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 PSMA1P25786 263 aaKnown RBP2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 PRSS3P35030 304 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 AKR1C3P42330 323 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 LGALS7P47929 136 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 GNB2P62879 340 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 PTGES3Q15185 160 aaKnown RBP2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OCIAD2Q56VL3 154 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 C1orf194Q5T5A4 169 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 DNM1P34Q6PK57 102 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 CD200R1LQ6Q8B3 271 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST2H3AQ71DI3 136 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 LYG1Q8N1E2 194 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 ARIH2OSQ8N7S6 290 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 Q8N9W7 124 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OR4S1Q8NGB4 309 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OR51D1Q8NGF3 324 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OR11L1Q8NGX0 322 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 HAVCR2Q8TDQ0 301 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 C15orf40Q8WUR7 153 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 ARL11Q969Q4 196 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 SMIM19Q96E16 107 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 BMFQ96LC9 184 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 KCTD7Q96MP8 289 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OR2V2Q96R30 315 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 OR52E6Q96RD3 313 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 RSPO3Q9BXY4 272 aaPredicted RBP2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 DPY30Q9C005 99 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 TLNRD1Q9H1K6 362 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 RERGLQ9H628 205 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 POPDC3Q9HBV1 291 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 UBQLN4Q9NRR5 601 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 UQCC1Q9NVA1 299 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 DOK5Q9P104 306 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 RPS6KB2Q9UBS0 482 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 ZNF223Q9UK11 482 aaPredicted RBP2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 ANGPT4Q9Y264 503 aa2.71□□□□□ -1.98
SFSWAP-211ENST00000542813 TRAV30A0A087WSZ9 112 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 TRAV14DV4A0A0A6YYC5 116 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 TGIF2-C20orf24A0A0A6YYL0 155 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 IGHV1OR15-9A0A0B4J2B8 117 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 A0A0D9SG52 128 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 IGHV3-64DA0A0J9YX35 117 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 IGHV5-10-1A0A0J9YXX1 117 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 TINCRA0A1B0GVN0 87 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 DAPL1A0PJW8 107 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 SNRPGP15A8MWD9 76 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 F5H5T6 163 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 F6UZH7 168 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 UPK2O00526 184 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 FFAR1O14842 300 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 CCL25O15444 150 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 SOX14O95416 240 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 IFNA5P01569 189 aa2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 MRPL3P09001 348 aaKnown RBP2.7□□□□□ -1.98
SFSWAP-211ENST00000542813 C8orf88P0DMB2 117 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms