RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ISOC2Q96AB3 205 aa11.4□□□□□ -0.59
LDB3-207ENST00000542786 SPTBN1Q01082 2364 aaKnown RBP11.39□□□□□ -0.59
LDB3-207ENST00000542786 A0A1W2PN81 502 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 TMEM250H0YL14 139 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 STAG3L3P0CL85 134 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 CHRNA7P36544 502 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 PSMB3P49720 205 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 FLI1Q01543 452 aaPredicted RBP11.39□□□□□ -0.59
LDB3-207ENST00000542786 CD69Q07108 199 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 GAMTQ14353 236 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 PRSS8Q16651 343 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 OR11H6Q8NGC7 330 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
LDB3-207ENST00000542786 IGLC7A0M8Q6 106 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 M0R1W7 72 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 MT-ND4LP03901 98 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 CNTFRP26992 372 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 B2MP61769 119 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 PSG5Q15238 335 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 MLANAQ16655 118 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 PNKDQ8N490 385 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 ONECUT1Q9UBC0 465 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 AMMECR1Q9Y4X0 333 aaPredicted RBP11.38□□□□□ -0.59
LDB3-207ENST00000542786 ODF3BA8MYP8 253 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 PAGE4O60829 102 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 NDUFS7O75251 213 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 NPPCP23582 126 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 GPX4P36969 197 aaPredicted RBP11.38□□□□□ -0.59
LDB3-207ENST00000542786 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 CACNG8Q8WXS5 425 aa11.38□□□□□ -0.59
LDB3-207ENST00000542786 SSBP3Q9BWW4 388 aaPredicted RBP11.38□□□□□ -0.59
LDB3-207ENST00000542786 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 ARL14EPLP0DKL9 152 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
LDB3-207ENST00000542786 ERHP84090 104 aaKnown RBP11.37□□□□□ -0.59
LDB3-207ENST00000542786 PNRC1Q12796 327 aaPredicted RBP11.37□□□□□ -0.59
LDB3-207ENST00000542786 RNF212Q495C1 297 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 CYP2G1PQ6ZSU1 146 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 SLC16A13Q7RTY0 426 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
LDB3-207ENST00000542786 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 INSIG2Q9Y5U4 225 aa11.37□□□□□ -0.59
LDB3-207ENST00000542786 LOC105371242A0A075B767 164 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 hCG_1809904A0A1W2PP81 198 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 A0A1W2PR64 198 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 A0A1W2PRV1 198 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 B4DEV8 164 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 ENSAO43768 121 aaKnown RBP11.36□□□□□ -0.59
LDB3-207ENST00000542786 CDKN1AP38936 164 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 RAB31Q13636 194 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 HABP2Q14520 560 aaPredicted RBP11.36□□□□□ -0.59
LDB3-207ENST00000542786 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
LDB3-207ENST00000542786 SEPSECSQ9HD40 501 aaKnown RBP11.36□□□□□ -0.59
LDB3-207ENST00000542786 NAV3Q8IVL0 2385 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 A0A1W2PPV4 95 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 OR2C1O95371 312 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 PRTN3P24158 256 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 ARF6P62330 175 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 PAX2Q02962 417 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 SPNS3Q6ZMD2 512 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 MMD2Q8IY49 270 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 ZNF114Q8NC26 417 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 CFHR4Q92496 578 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 RPEQ96AT9 228 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 MALSU1Q96EH3 234 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 UBTD1Q9HAC8 227 aa11.36□□□□□ -0.59
LDB3-207ENST00000542786 LRBAP50851 2863 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 PSMB11A5LHX3 300 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 CXorf1O96002 111 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 CRYGCP07315 174 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 RAB5AP20339 215 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 OR10J1P30954 320 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 COMPP49747 757 aaPredicted RBP11.35□□□□□ -0.59
LDB3-207ENST00000542786 MFAP2P55001 183 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 SMUG1Q53HV7 270 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 C1orf122Q6ZSJ8 110 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 FAM24BQ8N5W8 94 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 KIR3DL3Q8N743 410 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 IGFBPL1Q8WX77 278 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 SLC35E1Q96K37 410 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 OR4F4Q96R69 305 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 RNF5Q99942 180 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 PARLQ9H300 379 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 MLXQ9UH92 298 aa11.35□□□□□ -0.59
LDB3-207ENST00000542786 CFAP46Q8IYW2 2715 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 CXorf65A6NEN9 183 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 TEX22C9J3V5 150 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 OVOL3O00110 214 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 VENTXO95231 258 aa11.34□□□□□ -0.59
LDB3-207ENST00000542786 ZFP36P26651 326 aaKnown RBP11.34□□□□□ -0.59
LDB3-207ENST00000542786 GPR6P46095 362 aaPredicted RBP11.34□□□□□ -0.59
LDB3-207ENST00000542786 ATP5G3P48201 142 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms