RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	ADAMTSL5	Q6ZMM2	481 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	HAPLN4	Q86UW8	402 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	VN1R17P	Q8TDU5	208 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	GLYATL2	Q8WU03	294 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TMEM222	Q9H0R3	208 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	NAA60	Q9H7X0	242 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	PEMT	Q9UBM1	199 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	C14orf166	Q9Y224	244 aa	Known RBP	11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CRYM-AS1	A6NIL9	109 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	LGALS9	O00182	355 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ATG12	O94817	140 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR2C1	O95371	312 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	LY86	O95711	162 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CLEC3B	P05452	202 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ARL3	P36405	182 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	PYDC2	Q56P42	97 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	SLC25A24	Q6NUK1	477 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552		Q8N402	240 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR1L6	Q8NGR2	347 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR1P1	Q8NH06	330 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552	SCP2D1	Q9UJQ7	156 aa		11.74	□□□□□ -0.53
ECHDC2-223	ENST00000542552		A0A0G2JRQ6	117 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR5AC1	P0C628	307 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TRIM16L	Q309B1	348 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	AARD	Q4LEZ3	155 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR2C3	Q8N628	320 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ZNF114	Q8NC26	417 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	LHFPL5	Q8TAF8	219 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ATP6V0B	Q99437	205 aa		11.73	□□□□□ -0.53
ECHDC2-223	ENST00000542552	INS-IGF2	F8WCM5	200 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552		K7EIM0	57 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	AKR1C2	P52895	323 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	DHODH	Q02127	395 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CD69	Q07108	199 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	SELENOH	Q8IZQ5	122 aa	Known RBP	11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552		Q8N1Y9	231 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TMEM230	Q96A57	120 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	SCGB3A2	Q96PL1	93 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	MCUB	Q9NWR8	336 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TMEM56-RWDD3	S4R434	201 aa		11.72	□□□□□ -0.53
ECHDC2-223	ENST00000542552	C2orf70	A6NJV1	201 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552		A8MWP6	167 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552		F8W735	103 aa	Predicted RBP	11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ST8SIA3	O43173	380 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	GPR183	P32249	361 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	AP3S2	P59780	193 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	FAM106A	Q4KMX7	169 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552		Q6ZRM9	215 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	FAM219A	Q8IW50	185 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR2K2	Q8NGT1	345 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	SCARB1	Q8WTV0	552 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	DEDD2	Q8WXF8	326 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	RRNAD1	Q96FB5	475 aa	Known RBP	11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	GALNT14	Q96FL9	552 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	NDUFA13	Q9P0J0	144 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	SMAD5-AS1	Q9Y6J3	95 aa		11.71	□□□□□ -0.53
ECHDC2-223	ENST00000542552	IZUMO1R	A6ND01	250 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	TGOLN2	O43493	480 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	FOLR2	P14207	255 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	EDN2	P20800	178 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	FAU	P35544	74 aa	Known RBP	11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	SUPT4H1	P63272	117 aa	Known RBP	11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	SPANXN2	Q5MJ10	180 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	PVRIG	Q6DKI7	326 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	TOMM5	Q8N4H5	51 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	RBPMS	Q93062	196 aa	Known RBP	11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	SRR	Q9GZT4	340 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	PLEKHA3	Q9HB20	300 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	C21orf62	Q9NYP8	219 aa		11.7	□□□□□ -0.54
ECHDC2-223	ENST00000542552	STAB2	Q8WWQ8	2551 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	TMEM213	A2RRL7	107 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552		I3L2K1	104 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	NHLRC4	P0CG21	123 aa	Predicted RBP	11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	CBLN1	P23435	193 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	ERH	P84090	104 aa	Known RBP	11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	TMEM187	Q14656	261 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	DEFB114	Q30KQ6	69 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	LCN12	Q6JVE5	192 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	PLET1	Q6UQ28	207 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	UNQ9165/PRO28630	Q6UXU0	137 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	SGPP2	Q8IWX5	399 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	IL22RA2	Q969J5	263 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	BSCL2	Q96G97	398 aa	Predicted RBP	11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	ZC4H2	Q9NQZ6	224 aa		11.69	□□□□□ -0.54
ECHDC2-223	ENST00000542552	TENM3	Q9P273	2699 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	IGHV3-21	A0A0B4J1V1	117 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	OR2T8	A6NH00	312 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	IFNA17	P01571	189 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	FCGR2B	P31994	310 aa	Predicted RBP	11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	CD300E	Q496F6	205 aa	Predicted RBP	11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	SPINK9	Q5DT21	86 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	TMEM268	Q5VZI3	342 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	C11orf87	Q6NUJ2	197 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	SPSB3	Q6PJ21	355 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	OR52E5	Q8NH55	327 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	GPR146	Q96CH1	333 aa		11.68	□□□□□ -0.54
ECHDC2-223	ENST00000542552	ZNF414	Q96IQ9	312 aa		11.68	□□□□□ -0.54

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