RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 UNC119Q13432 240 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 DIAPH2-AS1Q14236 149 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 UTF1Q5T230 341 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 LYPD6Q86Y78 171 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 ZNF114Q8NC26 417 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 Q8TCH9 128 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 GGTLC1Q9BX51 225 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 GPR84Q9NQS5 396 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 IL36GQ9NZH8 169 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 DSPP15924 2871 aaKnown RBP9.26□□□□□ -0.93
CDH3-203ENST00000542274 MYO7BQ6PIF6 2116 aa9.26□□□□□ -0.93
CDH3-203ENST00000542274 A0A1W2PPM0 123 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 SYNGR1O43759 233 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 B3GALT5-AS1P59052 145 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 GVQW1Q8N7I0 195 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 BANF2Q9H503 90 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 GNG13Q9P2W3 67 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 A6NDN8 102 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 LRRC3CA6NJW4 275 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 J3QLI3 93 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 IGHV3-9P01782 118 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 SEC11AP67812 179 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 SP5Q6BEB4 398 aaPredicted RBP9.25□□□□□ -0.93
CDH3-203ENST00000542274 SLC25A34Q6PIV7 304 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 EHFQ9NZC4 300 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 KLK13Q9UKR3 277 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 CXCL13O43927 109 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 IGHG4P01861 327 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 HIST1H1DP16402 221 aaKnown RBP9.25□□□□□ -0.93
CDH3-203ENST00000542274 HTR1DP28221 377 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 INSL3P51460 131 aa9.25□□□□□ -0.93
CDH3-203ENST00000542274 ZFP92A6NM28 416 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 RS1O15537 224 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 SYNGR3O43761 229 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 DEDDO75618 318 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 TUSC2O75896 110 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 P04436 131 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 TCTAP57738 103 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
CDH3-203ENST00000542274 RSPO1Q2MKA7 263 aaPredicted RBP9.24□□□□□ -0.93
CDH3-203ENST00000542274 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 ADGRE4PQ86SQ3 457 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 TEX29Q8N6K0 151 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 NABP1Q96AH0 204 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 ARID1AO14497 2285 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 hADV38S2A0JD32 116 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 MBD3L4A6NDZ8 208 aaPredicted RBP9.24□□□□□ -0.93
CDH3-203ENST00000542274 MBD3L3A6NE82 208 aaPredicted RBP9.24□□□□□ -0.93
CDH3-203ENST00000542274 MBD3L5A6NJ08 208 aaPredicted RBP9.24□□□□□ -0.93
CDH3-203ENST00000542274 KIAA1324LA8MWY0 1029 aaPredicted RBP9.24□□□□□ -0.93
CDH3-203ENST00000542274 SOCS1O15524 211 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 CA2P00918 260 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 VSIG8P0DPA2 414 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 Q6AWC8 147 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 GGNQ86UU5 652 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 LYZL4Q96KX0 146 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 SMIM7Q9BQ49 75 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 TMEM126AQ9H061 195 aa9.24□□□□□ -0.93
CDH3-203ENST00000542274 LSM5Q9Y4Y9 91 aaKnown RBP9.24□□□□□ -0.93
CDH3-203ENST00000542274 KIAA1549Q9HCM3 1950 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 WT1P19544 449 aaPredicted RBP9.23□□□□□ -0.93
CDH3-203ENST00000542274 WFDC2Q14508 124 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 CYP2G1PQ6ZSU1 146 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 OR5AS1Q8N127 324 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 EMG1Q92979 244 aaKnown RBP9.23□□□□□ -0.93
CDH3-203ENST00000542274 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 COMMD5Q9GZQ3 224 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 HES4Q9HCC6 221 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 IGKV1-9A0A0C4DH69 117 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 FABP2P12104 132 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 CFPP27918 469 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 SRYQ05066 204 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 ETDBQ3ZM63 59 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 VAX1Q5SQQ9 334 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 C1orf100Q5SVJ3 147 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 HAPLN4Q86UW8 402 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 STPG3Q8N7X2 389 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 FLYWCH2Q96CP2 140 aaKnown RBP9.23□□□□□ -0.93
CDH3-203ENST00000542274 GNPNAT1Q96EK6 184 aaPredicted RBP9.23□□□□□ -0.93
CDH3-203ENST00000542274 CEP295Q9C0D2 2601 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 DLL3Q9NYJ7 618 aa9.23□□□□□ -0.93
CDH3-203ENST00000542274 CISD1Q9NZ45 108 aaKnown RBP9.23□□□□□ -0.93
CDH3-203ENST00000542274 DOCK7Q96N67 2140 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 A0A0A6YYD4 124 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 DUXBA0A1W2PPF3 345 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 ENSAO43768 121 aaKnown RBP9.22□□□□□ -0.93
CDH3-203ENST00000542274 LINC00694P0DN24 101 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 ZNF20P17024 532 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 PSG4Q00888 419 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 KLRD1Q13241 179 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 ZNF146Q15072 292 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 Q56UQ5 140 aa9.22□□□□□ -0.93
CDH3-203ENST00000542274 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms