RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 A0A1W2PPE2 198 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 A0A1W2PR64 198 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 A0A1W2PRV1 198 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 FCN1O00602 326 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 LMO4P61968 165 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 SRSF1Q07955 248 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■□□□□ 9.8
TMEM50B-210ENST00000542230 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 RAB24Q969Q5 203 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 GGTLC1Q9BX51 225 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 SLC39A9Q9NUM3 307 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 FKBP11Q9NYL4 201 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 PRTN3P24158 256 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 DLK1P80370 383 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 PSG5Q15238 335 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 BSXQ3C1V8 233 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 RUSC1-AS1Q66K80 236 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 FBXL15Q9H469 300 aa13.85□□□□□ -0.19
TMEM50B-210ENST00000542230 BTBD17A6NE02 478 aa13.84□□□□□ -0.19
TMEM50B-210ENST00000542230 PAX2Q02962 417 aa13.84□□□□□ -0.19
TMEM50B-210ENST00000542230 TPTE2P1Q5T6R2 138 aa13.84□□□□□ -0.19
TMEM50B-210ENST00000542230 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
TMEM50B-210ENST00000542230 OR11H6Q8NGC7 330 aa13.84□□□□□ -0.19
TMEM50B-210ENST00000542230 LY86O95711 162 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 CRYGBP07316 175 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 SRP19P09132 144 aaKnown RBP13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 GATA2P23769 480 aaPredicted RBP13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 HTR1DP28221 377 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 GNB1P62873 340 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 VMA21Q3ZAQ7 101 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 CLRN3Q8NCR9 226 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 OR2T6Q8NHC8 308 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 NPVFQ9HCQ7 196 aa13.83□□□□□ -0.19
TMEM50B-210ENST00000542230 HBE1P02100 147 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 LGALS7P47929 136 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 SSBP2P81877 361 aaPredicted RBP13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 SSX2Q16385 188 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 PRSS8Q16651 343 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 ZNF506Q5JVG8 444 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 VSTM2AQ8TAG5 236 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 GGACTQ9BVM4 153 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 SIGLEC9Q9Y336 463 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 PXMP4Q9Y6I8 212 aa13.83□□□□□ -0.2
TMEM50B-210ENST00000542230 LOC102723971A0A1B0GUV8 181 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 ODF3BA8MYP8 253 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 M0R1W7 72 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 AREGP15514 252 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 GAMTQ14353 236 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 TNXAQ16473 311 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 C2orf83Q53S99 150 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 DPM3Q9P2X0 92 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 METTL1Q9UBP6 276 aaKnown RBP13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 ANKRD17O75179 2603 aaKnown RBP13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 FNDC4Q9H6D8 234 aaPredicted RBP13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 TENM4Q6N022 2769 aa13.82□□□□□ -0.2
TMEM50B-210ENST00000542230 C17orf112F2Z3M2 114 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 VENTXO95231 258 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 SNAPINO95295 136 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 HOXB4P17483 251 aaPredicted RBP13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 IQCF2Q8IXL9 164 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 OR4A5Q8NH83 315 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 CFHR4Q92496 578 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 P2RX4Q99571 388 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 MRPL36Q9P0J6 103 aaKnown RBP13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 AMMECR1Q9Y4X0 333 aaPredicted RBP13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 KPTNQ9Y664 436 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 CTXND1A0A1B0GTU2 59 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 A1L4Q6 167 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 BCL2P10415 239 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 MFAP2P55001 183 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 SOHLH1Q5JUK2 328 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 SPATA31B1PQ5VZV4 182 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 TEPPQ6URK8 271 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 CCL19Q99731 98 aa13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 PUS1Q9Y606 427 aaKnown RBP eCLIP13.81□□□□□ -0.2
TMEM50B-210ENST00000542230 IGLC7A0M8Q6 106 aa13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 OPRK1P41145 380 aa13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 AWAT1Q58HT5 328 aa13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 STPG3Q8N7X2 389 aa13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 SIRPDQ9H106 197 aa13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 SNRNP70P08621 437 aaKnown RBP13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 ERHP84090 104 aaKnown RBP13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 TEX45Q8NA69 505 aa13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 ACTR3CQ9C0K3 210 aaPredicted RBP13.8□□□□□ -0.2
TMEM50B-210ENST00000542230 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 SOX15O60248 233 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 CDC34P49427 236 aaPredicted RBP13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 B2MP61769 119 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 ACOT6Q3I5F7 207 aaPredicted RBP13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 ABHD5Q8WTS1 349 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 ACY3Q96HD9 319 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 SEPSECSQ9HD40 501 aaKnown RBP13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 IGHV2-70DA0A0C4DH43 119 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 M0R036 132 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 MPDU1O75352 247 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 MBP02144 154 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 TBX15Q96SF7 602 aa13.79□□□□□ -0.2
TMEM50B-210ENST00000542230 IGHV4-61A0A0C4DH41 118 aa13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 HSPB1P04792 205 aaKnown RBP13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 LINC00869P0C866 280 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms