RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TACC2O95359 2948 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 KIR2DL5BA0A0G2JN68 375 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 KIR2DL5BA0A0G2JPC4 375 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 TMEM210A6NLX4 147 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 NPY1RP25929 384 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 SUMO1P63165 101 aaKnown RBP12.62□□□□□ -0.39
CNOT9-208ENST00000542068 TPTE2P1Q5T6R2 138 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 LHFPL4Q7Z7J7 247 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 KIR2DL5AQ8N109 375 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
CNOT9-208ENST00000542068 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 MORN2Q502X0 79 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 TEPPQ6URK8 271 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 RND1Q92730 232 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 EAF1Q96JC9 268 aaPredicted RBP12.61□□□□□ -0.39
CNOT9-208ENST00000542068 RCHY1Q96PM5 261 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 NPVFQ9HCQ7 196 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 ZNF71Q9NQZ8 489 aaPredicted RBP12.61□□□□□ -0.39
CNOT9-208ENST00000542068 HELTA6NFD8 242 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 DIRC3C9JPN6 131 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 ZNF253O75346 499 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 CD99P14209 185 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 RHOBP62745 196 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 RELBQ01201 579 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 WFDC8Q8IUA0 241 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 SNRNP40Q96DI7 357 aaKnown RBP12.61□□□□□ -0.39
CNOT9-208ENST00000542068 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 TBL2Q9Y4P3 447 aaKnown RBP12.61□□□□□ -0.39
CNOT9-208ENST00000542068 MMDQ15546 238 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 MSMPQ1L6U9 139 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 DCAF16Q9NXF7 216 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 KALRNO60229 2985 aa12.61□□□□□ -0.39
CNOT9-208ENST00000542068 RELNP78509 3460 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 SPTBN4Q9H254 2564 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 VDAC2P45880 294 aaPredicted RBP12.6□□□□□ -0.39
CNOT9-208ENST00000542068 DMRTA1Q5VZB9 504 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 PRR27Q6MZM9 219 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 Q6ZVH6 145 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 SLC24A4Q8NFF2 622 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 C1orf159Q96HA4 380 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 CCL13Q99616 98 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 C15orf65H3BRN8 121 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 SRIP30626 198 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 SELENOVP59797 346 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 TXN2Q99757 166 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 MIEN1Q9BRT3 115 aa12.6□□□□□ -0.39
CNOT9-208ENST00000542068 NAV3Q8IVL0 2385 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 K7EM74 188 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 IGKV3-15P01624 115 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 KLF3P57682 345 aaPredicted RBP12.59□□□□□ -0.39
CNOT9-208ENST00000542068 RAB31Q13636 194 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 CHD8Q9HCK8 2581 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 PRB4P10163 310 aaPredicted RBP12.59□□□□□ -0.39
CNOT9-208ENST00000542068 REG1BP48304 166 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 YPEL3P61236 119 aaPredicted RBP12.59□□□□□ -0.39
CNOT9-208ENST00000542068 PRB3Q04118 309 aaPredicted RBP12.59□□□□□ -0.39
CNOT9-208ENST00000542068 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 IGKV1D-17A0A075B6S4 117 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 TNFSF13O75888 250 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 LGALS4P56470 323 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 RPH3ALQ9UNE2 315 aa12.59□□□□□ -0.39
CNOT9-208ENST00000542068 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 RANP62826 216 aaKnown RBP12.58□□□□□ -0.4
CNOT9-208ENST00000542068 MAJINQ3KP22 176 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 PTPRQQ9UMZ3 2332 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 DLEU1O43261 78 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 TCF21O43680 179 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 SPATA45Q537H7 98 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 H1FXQ92522 213 aaKnown RBP12.58□□□□□ -0.4
CNOT9-208ENST00000542068 RAB1CQ92928 201 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 LPAR2Q9HBW0 351 aa12.58□□□□□ -0.4
CNOT9-208ENST00000542068 MPDU1O75352 247 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 MT-CO2P00403 227 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 PLAUP00749 431 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 ADH4P08319 380 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 TIGITQ495A1 244 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 GCSAMQ8N6F7 178 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 FAM216BQ8N7L0 139 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 NABP2Q9BQ15 211 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 NRN1Q9NPD7 142 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 OR9G1Q8NH87 305 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
CNOT9-208ENST00000542068 MALRD1Q5VYJ5 2156 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 BRS3P32247 399 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 IFI27L2Q9H2X8 130 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 V9GYV3 84 aa12.57□□□□□ -0.4
CNOT9-208ENST00000542068 GPR6P46095 362 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-208ENST00000542068 TNFAIP6P98066 277 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-208ENST00000542068 Q6ZN92 141 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 C11orf42Q8N5U0 333 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 OR51B2Q9Y5P1 312 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 ANKHD1Q8IWZ3 2542 aaKnown RBP12.56□□□□□ -0.4
CNOT9-208ENST00000542068 SAA2-SAA4A0A096LPE2 208 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms