RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 IGLV1-47P01700 117 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 PRTN3P24158 256 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 REG1BP48304 166 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 TFPI2P48307 235 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 ZNF137PP52743 207 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 DSCR9P59020 149 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 HLA-DRB5Q30154 266 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 DMRTA1Q5VZB9 504 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 ETFRF1Q6IPR1 90 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 C1orf122Q6ZSJ8 110 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 H2BFWTQ7Z2G1 175 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 PNKDQ8N490 385 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 BEND2Q8NDZ0 799 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 ST6GALNAC6Q969X2 333 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 C11orf1Q9H5F2 150 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 CSMD2Q7Z408 3487 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 IGHV2-70DA0A0C4DH43 119 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 TMEM50AO95807 157 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 GZMBP10144 247 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 FGF7P21781 194 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 NUTF2P61970 127 aaKnown RBP7.05□□□□□ -1.28
THBS3-210ENST00000541576 RPP30P78346 268 aaKnown RBP7.05□□□□□ -1.28
THBS3-210ENST00000541576 PAX2Q02962 417 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 DIAPH2-AS1Q14236 149 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 RTL8BQ17RB0 113 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 RPUSD4Q96CM3 377 aaKnown RBP7.05□□□□□ -1.28
THBS3-210ENST00000541576 TVP23CQ96ET8 276 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 SNHG12Q9BXW3 62 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 SLC35D1Q9NTN3 355 aa7.05□□□□□ -1.28
THBS3-210ENST00000541576 ABCA2Q9BZC7 2435 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 E5RGE8 158 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 APOA2P02652 100 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 ERVK-16P61578 105 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 RPS16P62249 146 aaKnown RBP7.04□□□□□ -1.28
THBS3-210ENST00000541576 OR5C1Q8NGR4 320 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 NSG2Q9Y328 171 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 AMMECR1Q9Y4X0 333 aaPredicted RBP7.04□□□□□ -1.28
THBS3-210ENST00000541576 CEBPZOSA8MTT3 80 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 BUB1B-PAK6H3BSN5 160 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 VKORC1L1Q8N0U8 176 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 OR4P4Q8NGL7 312 aa7.04□□□□□ -1.28
THBS3-210ENST00000541576 H0YJW9 148 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 CHST1O43916 411 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 AMBPP02760 352 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 S100A7P31151 101 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 ELLP55199 621 aaPredicted RBP7.03□□□□□ -1.28
THBS3-210ENST00000541576 VMO1Q7Z5L0 202 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 OR11H6Q8NGC7 330 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 OR5AN1Q8NGI8 311 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 NABP2Q9BQ15 211 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 LPAR2Q9HBW0 351 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 A8MWP6 167 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 RBMXL2O75526 392 aaKnown RBP7.03□□□□□ -1.28
THBS3-210ENST00000541576 IGKV1-16P04430 117 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 P2RY1P47900 373 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 PAX9P55771 341 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 NEU1Q99519 415 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 PCGF1Q9BSM1 259 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.03□□□□□ -1.28
THBS3-210ENST00000541576 FUT9Q9Y231 359 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 GOLT1BQ9Y3E0 138 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 CREBBPQ92793 2442 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 TCF21O43680 179 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 HRASP01112 189 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 SRP19P09132 144 aaKnown RBP7.03□□□□□ -1.28
THBS3-210ENST00000541576 EWSR1Q01844 656 aaKnown RBP eCLIP7.03□□□□□ -1.28
THBS3-210ENST00000541576 KLRD1Q13241 179 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 RPEQ96AT9 228 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 SCRT1Q9BWW7 348 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 SIRPDQ9H106 197 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
THBS3-210ENST00000541576 BEX4Q9NWD9 120 aaPredicted RBP7.03□□□□□ -1.28
THBS3-210ENST00000541576 POLR3KQ9Y2Y1 108 aaPredicted RBP7.03□□□□□ -1.28
THBS3-210ENST00000541576 FAM90A9PA6NNJ1 464 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 FAM90A26D6RGX4 464 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 TGOLN2O43493 480 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 SLC25A16P16260 332 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 RNF151Q2KHN1 245 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 HCP5Q6MZN7 132 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 OR4X1Q8NH49 305 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 C2orf88Q9BSF0 95 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 NDUFAF3Q9BU61 184 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 TRAV34A0A0B4J273 112 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 TOX4O94842 621 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 GAPDHP04406 335 aaKnown RBP7.02□□□□□ -1.29
THBS3-210ENST00000541576 OR9G9P0C7N8 305 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 SEC11BP0C7V7 166 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 HNF1AP20823 631 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 HTR1DP28221 377 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 DYNLT3P51808 116 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 TMEM267Q0VDI3 215 aaPredicted RBP7.02□□□□□ -1.29
THBS3-210ENST00000541576 DEFB113Q30KQ7 82 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 HIST2H2BCQ6DN03 193 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 TEX38Q6PEX7 206 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 PDPNQ86YL7 162 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 OR4A16Q8NH70 328 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 OSR1Q8TAX0 266 aaPredicted RBP7.02□□□□□ -1.29
THBS3-210ENST00000541576 LHX4Q969G2 390 aa7.02□□□□□ -1.29
THBS3-210ENST00000541576 FLYWCH2Q96CP2 140 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms