RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 P0C879 139 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 G0S2P27469 103 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 MISP3Q96FF7 219 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 C1orf159Q96HA4 380 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 SMDT1Q9H4I9 107 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 CBLN4Q9NTU7 201 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 IDI2-AS1Q9NZ38 188 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 SLC25A10Q9UBX3 287 aaPredicted RBP12.29□□□□□ -0.44
VARS2-211ENST00000541562 UTP20O75691 2785 aaKnown RBP12.29□□□□□ -0.44
VARS2-211ENST00000541562 FAM90A27PA6NNH2 459 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 ADMP35318 185 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 GNG5P63218 68 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 EIF4EBP1Q13541 118 aaPredicted RBP12.29□□□□□ -0.44
VARS2-211ENST00000541562 SP5Q6BEB4 398 aaPredicted RBP12.29□□□□□ -0.44
VARS2-211ENST00000541562 DPPA3Q6W0C5 159 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 ATOH7Q8N100 152 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 KBTBD11-OT1A0A1B0GTJ5 212 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
VARS2-211ENST00000541562 GCHFRP30047 84 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 GFRALQ6UXV0 394 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 RBMXL3Q8N7X1 1067 aaKnown RBP12.28□□□□□ -0.44
VARS2-211ENST00000541562 CT45A6P0DMU7 189 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 CT45A5P0DMU8 189 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 CT45A7P0DMV0 189 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
VARS2-211ENST00000541562 COMMD5Q9GZQ3 224 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 SAP30LQ9HAJ7 183 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 FAM90A26D6RGX4 464 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 K7EN84 100 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 NTF3P20783 257 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 SFRP2Q96HF1 295 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 NABP2Q9BQ15 211 aa12.28□□□□□ -0.44
VARS2-211ENST00000541562 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 DPRXA6NFQ7 191 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 FCN1O00602 326 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 MBP02144 154 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 VDAC2P45880 294 aaPredicted RBP12.27□□□□□ -0.44
VARS2-211ENST00000541562 CTAG1AP78358 180 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 BAGE3Q86Y29 109 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 BAGE2Q86Y30 109 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 NPIPB3Q92617 1050 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 GAFA1Q96PS6 74 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 MANBALQ9NQG1 85 aa12.27□□□□□ -0.44
VARS2-211ENST00000541562 A0A0G2JNJ9 132 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 GZMBP10144 247 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 PMCHP20382 165 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 GLRXP35754 106 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 ATP6V1FQ16864 119 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 ZNF664Q8N3J9 261 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 ZBTB34Q8NCN2 500 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 P2RX4Q99571 388 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 SRD5A3Q9H8P0 318 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 Q9UFV3 132 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 SETD2Q9BYW2 2564 aaPredicted RBP12.27□□□□□ -0.45
VARS2-211ENST00000541562 IGHV3-35A0A0C4DH35 117 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 B4DEV8 164 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 IGLV1-44P01699 117 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 HSPE1P61604 102 aaKnown RBP12.27□□□□□ -0.45
VARS2-211ENST00000541562 OR10G8Q8NGN5 311 aa12.27□□□□□ -0.45
VARS2-211ENST00000541562 MRPL36Q9P0J6 103 aaKnown RBP12.27□□□□□ -0.45
VARS2-211ENST00000541562 HIVEP3Q5T1R4 2406 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 HRNRQ86YZ3 2850 aaPredicted RBP12.26□□□□□ -0.45
VARS2-211ENST00000541562 TRGV8A0A0C4DH27 118 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 CCKARP32238 428 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 CAMPP49913 170 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 S100A12P80511 92 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 C1orf185Q5T7R7 199 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 DMRTC2Q8IXT2 367 aaPredicted RBP12.26□□□□□ -0.45
VARS2-211ENST00000541562 FAM19A2Q8N3H0 131 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 C14orf144Q96I85 54 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 JPT1Q9UK76 154 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 PITPNC1Q9UKF7 332 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 PAM16Q9Y3D7 125 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
VARS2-211ENST00000541562 SNURFLB1AK76 121 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 GPR6P46095 362 aaPredicted RBP12.26□□□□□ -0.45
VARS2-211ENST00000541562 LOXL4Q96JB6 756 aa12.26□□□□□ -0.45
VARS2-211ENST00000541562 H0Y8G0 127 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 RPL29P47914 159 aaKnown RBP12.25□□□□□ -0.45
VARS2-211ENST00000541562 HTD2P86397 168 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 KRTCAP3Q53RY4 240 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 CENPWQ5EE01 88 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 MBNL2Q5VZF2 373 aaKnown RBP12.25□□□□□ -0.45
VARS2-211ENST00000541562 ZNF705AQ6ZN79 300 aaPredicted RBP12.25□□□□□ -0.45
VARS2-211ENST00000541562 USP9YO00507 2555 aaPredicted RBP12.25□□□□□ -0.45
VARS2-211ENST00000541562 TEX50A0A1B0GTY4 177 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 C15orf61A6NNL5 157 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 ZNF891A8MT65 544 aaPredicted RBP12.25□□□□□ -0.45
VARS2-211ENST00000541562 YPEL1O60688 119 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 HIST1H1BP16401 226 aaKnown RBP12.25□□□□□ -0.45
VARS2-211ENST00000541562 DDTP30046 118 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 CNN1P51911 297 aaKnown RBP12.25□□□□□ -0.45
VARS2-211ENST00000541562 RND2P52198 227 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 KRTDAPP60985 99 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 TIMM23BQ5SRD1 257 aa12.25□□□□□ -0.45
VARS2-211ENST00000541562 TOMM20LQ6UXN7 152 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms