RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PLCXD1Q9NUJ7 323 aa8.47□□□□□ -1.05
COPA-205ENST00000541366 TMEM140Q9NV12 185 aa8.47□□□□□ -1.05
COPA-205ENST00000541366 F11RQ9Y624 299 aaKnown RBP8.47□□□□□ -1.05
COPA-205ENST00000541366 TRAV14DV4A0A0A6YYC5 116 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 KNCNA6PVL3 124 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 DFFBO76075 338 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 TRAPPC2P0DI81 140 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 TRAPPC2BP0DI82 140 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 DTYMKP23919 212 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 TNP2Q05952 138 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 CDNFQ49AH0 187 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.06
COPA-205ENST00000541366 UBE2DNLQ8IWF7 75 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 Q8N1X5 172 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 NUDCD2Q8WVJ2 157 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 SECTM1Q8WVN6 248 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 OR10C1Q96KK4 312 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 CMTM3Q96MX0 182 aa8.46□□□□□ -1.06
COPA-205ENST00000541366 SRSF8Q9BRL6 282 aaKnown RBP8.46□□□□□ -1.06
COPA-205ENST00000541366 PTGES3LE9PB15 166 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 DNASE2O00115 360 aaPredicted RBP8.45□□□□□ -1.06
COPA-205ENST00000541366 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 ARL6IP5O75915 188 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 CD74P04233 296 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 CTXN2P0C2S0 81 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 HSMCR30P0CW71 290 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 PAFAH1B2P68402 229 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 FABP5Q01469 135 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 POU2AF1Q16633 256 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 C8orf59Q8N0T1 100 aaPredicted RBP8.45□□□□□ -1.06
COPA-205ENST00000541366 CSNK1G2-AS1Q8NCQ2 148 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 UFD1Q92890 307 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 DGCR14Q96DF8 476 aaKnown RBP8.45□□□□□ -1.06
COPA-205ENST00000541366 CENPOQ9BU64 300 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 ATG5Q9H1Y0 275 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 SCRT2Q9NQ03 307 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 TBC1D24Q9ULP9 559 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 NSG2Q9Y328 171 aa8.45□□□□□ -1.06
COPA-205ENST00000541366 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
COPA-205ENST00000541366 CYB5BO43169 146 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 SSX5O60225 188 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 IFNA21P01568 189 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 IFNA17P01571 189 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 NQO2P16083 231 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 TAS2R31P59538 309 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 RPL11P62913 178 aaKnown RBP8.44□□□□□ -1.06
COPA-205ENST00000541366 SSX1Q16384 188 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 SOHLH1Q5JUK2 328 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 CNIH2Q6PI25 160 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 DMBX1Q8NFW5 382 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 ATP6V0BQ99437 205 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 NDUFA4L2Q9NRX3 87 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 RABAC1Q9UI14 185 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 FAT1Q14517 4588 aa8.44□□□□□ -1.06
COPA-205ENST00000541366 TMEM235A6NFC5 223 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 HPRT1P00492 218 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 RAB6AP20340 208 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 RELQ04864 619 aaPredicted RBP8.43□□□□□ -1.06
COPA-205ENST00000541366 UBE2UQ5VVX9 321 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 OR1L8Q8NGR8 309 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 OR51H1Q8NH63 302 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 SLC25A46Q96AG3 418 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 AIFM2Q9BRQ8 373 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 NXF2Q9GZY0 626 aaKnown RBP8.43□□□□□ -1.06
COPA-205ENST00000541366 DCSTAMPQ9H295 470 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 VSIRQ9H7M9 311 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 ANXA10Q9UJ72 324 aa8.43□□□□□ -1.06
COPA-205ENST00000541366 SMIM30A4D0T7 59 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 METTL21EPA6NDL7 271 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 DBX1A6NMT0 343 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 IFITM5A6NNB3 132 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 I3L2K1 104 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 RBFOX2O43251 390 aaKnown RBP eCLIP8.42□□□□□ -1.06
COPA-205ENST00000541366 ZNF688P0C7X2 276 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 FCGR2CP31995 323 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 ACTL10Q5JWF8 245 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 HACD4Q5VWC8 232 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 MORN3Q6PF18 240 aaPredicted RBP8.42□□□□□ -1.06
COPA-205ENST00000541366 TOMM20LQ6UXN7 152 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 OR13F1Q8NGS4 319 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 LSM10Q969L4 123 aaKnown RBP8.42□□□□□ -1.06
COPA-205ENST00000541366 MISP3Q96FF7 219 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 TMEM14BQ9NUH8 114 aa8.42□□□□□ -1.06
COPA-205ENST00000541366 EIF4EP06730 217 aaKnown RBP8.41□□□□□ -1.06
COPA-205ENST00000541366 FCER2P06734 321 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 SPP1P10451 314 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 MFAP4P55083 255 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 FXYD4P59646 89 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 THOC7Q6I9Y2 204 aaKnown RBP8.41□□□□□ -1.06
COPA-205ENST00000541366 ZNF818PQ6ZRF7 136 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 HSD17B13Q7Z5P4 300 aaPredicted RBP8.41□□□□□ -1.06
COPA-205ENST00000541366 DUSP18Q8NEJ0 188 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 STXBP6Q8NFX7 210 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 SLC5A7Q9GZV3 580 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 OR51B2Q9Y5P1 312 aa8.41□□□□□ -1.06
COPA-205ENST00000541366 MARCH11A6NNE9 402 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 K7EQG2 157 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 MT-CO2P00403 227 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms