RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ABHD12Q8N2K0 398 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 OCC1Q8TAD7 63 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 FAM234AQ9H0X4 552 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 IGHV3-7P01780 117 aa14.02□□□□□ -0.16
SPIDR-227ENST00000541342 CD3EP07766 207 aa14.02□□□□□ -0.16
SPIDR-227ENST00000541342 C17orf58Q2M2W7 97 aa14.02□□□□□ -0.16
SPIDR-227ENST00000541342 PDLIM3Q53GG5 364 aaPredicted RBP14.02□□□□□ -0.16
SPIDR-227ENST00000541342 SNHG12Q9BXW3 62 aa14.02□□□□□ -0.16
SPIDR-227ENST00000541342 FKBP11Q9NYL4 201 aa14.02□□□□□ -0.16
SPIDR-227ENST00000541342 LSM4Q9Y4Z0 139 aaKnown RBP14.02□□□□□ -0.16
SPIDR-227ENST00000541342 K7EN84 100 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 MPDU1O75352 247 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 GPR12P47775 334 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 RELBQ01201 579 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 MORN2Q502X0 79 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 PRAMEF5Q5TYX0 476 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 NEU1Q99519 415 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 F2RL2O00254 374 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 HPRT1P00492 218 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 HLA-DRB5Q30154 266 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 SPATA31B1PQ5VZV4 182 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 CALYQ9NYX4 217 aa14.02□□□□□ -0.17
SPIDR-227ENST00000541342 GRIFINA4D1Z8 144 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 CD33P20138 364 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 THBS3P49746 956 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 YPEL3P61236 119 aaPredicted RBP14.01□□□□□ -0.17
SPIDR-227ENST00000541342 SEPSECSQ9HD40 501 aaKnown RBP14.01□□□□□ -0.17
SPIDR-227ENST00000541342 JPT1Q9UK76 154 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 ANKHD1Q8IWZ3 2542 aaKnown RBP14.01□□□□□ -0.17
SPIDR-227ENST00000541342 KIR2DL5BA0A0G2JN68 375 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 KIR2DL5BA0A0G2JPC4 375 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 FAM90A9PA6NNJ1 464 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 VSTM5A8MXK1 200 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 NUTF2P61970 127 aaKnown RBP14.01□□□□□ -0.17
SPIDR-227ENST00000541342 KIR2DL5AQ8N109 375 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 SSMEM1Q8WWF3 244 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 NCOR1P1Q9H4R4 102 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 CBLN4Q9NTU7 201 aa14.01□□□□□ -0.17
SPIDR-227ENST00000541342 HRNRQ86YZ3 2850 aaPredicted RBP14.01□□□□□ -0.17
SPIDR-227ENST00000541342 FCN3O75636 299 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 APOBEC3AP31941 199 aaPredicted RBP14□□□□□ -0.17
SPIDR-227ENST00000541342 ARSJQ5FYB0 599 aaPredicted RBP14□□□□□ -0.17
SPIDR-227ENST00000541342 HEYLQ9NQ87 328 aaPredicted RBP14□□□□□ -0.17
SPIDR-227ENST00000541342 GNG12Q9UBI6 72 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 TMEM178BH3BS89 294 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 SCGB1D1O95968 90 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 FRMD6-AS1P0C7T7 363 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 OR52E5Q8NH55 327 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 OR4A16Q8NH70 328 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 ATG101Q9BSB4 218 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 IFI27L2Q9H2X8 130 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 PKD1L2Q7Z442 2459 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 M0R1X1 148 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 YPEL1O60688 119 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 CXorf1O96002 111 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 C1orf194Q5T5A4 169 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 CCL17Q92583 94 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 YPEL2Q96QA6 119 aa14□□□□□ -0.17
SPIDR-227ENST00000541342 EFNB3Q15768 340 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 DYNLRB1Q9NP97 96 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 NAGKQ9UJ70 344 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 TNCP24821 2201 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 MDFIC2A0A1B0GVS7 189 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 SOX15O60248 233 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 FOXH1O75593 365 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 CBLN1P23435 193 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 LEAP2Q969E1 77 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 TMEM140Q9NV12 185 aa13.99□□□□□ -0.17
SPIDR-227ENST00000541342 KBTBD11-OT1A0A1B0GTJ5 212 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 SLC17A3O00476 420 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 SFTPCP11686 197 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 SELENOTP62341 195 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 RPL31P62899 125 aaKnown RBP13.98□□□□□ -0.17
SPIDR-227ENST00000541342 TMEM106BQ9NUM4 274 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 IL6RP08887 468 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-227ENST00000541342 ERVFC1-1P60608 527 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 Q6ZWC4 215 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 DDB2Q92466 427 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 TXNDC17Q9BRA2 123 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 LOXP28300 417 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-227ENST00000541342 GCHFRP30047 84 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 OR10G8Q8NGN5 311 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 MS4A10Q96PG2 267 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
SPIDR-227ENST00000541342 TDRG1Q3Y452 100 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 YLPM1P49750 1951 aaKnown RBP13.97□□□□□ -0.17
SPIDR-227ENST00000541342 PPIAL4EA0A075B759 164 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 TRGV10A0A0A0MS01 117 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 B9A039 149 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 PPIAL4DF5H284 164 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 TCAPO15273 167 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 PPIAL4FP0DN26 164 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 STPG3Q8N7X2 389 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 BTF3L4Q96K17 158 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 PPIAL4AQ9Y536 164 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 TNFRSF13BO14836 293 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-227ENST00000541342 RPP30P78346 268 aaKnown RBP13.97□□□□□ -0.17
SPIDR-227ENST00000541342 ZNF124Q15973 351 aa13.97□□□□□ -0.17
SPIDR-227ENST00000541342 TPRP12270 2363 aaKnown RBP13.96□□□□□ -0.17
SPIDR-227ENST00000541342 F2Z2F3 143 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms