RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SP6Q3SY56 376 aa10□□□□□ -0.81
LTBR-208ENST00000541005 AARDQ4LEZ3 155 aa10□□□□□ -0.81
LTBR-208ENST00000541005 FAM219AQ8IW50 185 aa10□□□□□ -0.81
LTBR-208ENST00000541005 TOMM5Q8N4H5 51 aa10□□□□□ -0.81
LTBR-208ENST00000541005 OR2C3Q8N628 320 aa10□□□□□ -0.81
LTBR-208ENST00000541005 OR1L6Q8NGR2 347 aa10□□□□□ -0.81
LTBR-208ENST00000541005 OR1P1Q8NH06 330 aa10□□□□□ -0.81
LTBR-208ENST00000541005 ZNF502Q8TBZ5 544 aa10□□□□□ -0.81
LTBR-208ENST00000541005 VN1R17PQ8TDU5 208 aa10□□□□□ -0.81
LTBR-208ENST00000541005 TMEM230Q96A57 120 aa10□□□□□ -0.81
LTBR-208ENST00000541005 GALNT14Q96FL9 552 aa10□□□□□ -0.81
LTBR-208ENST00000541005 ATP6V0BQ99437 205 aa10□□□□□ -0.81
LTBR-208ENST00000541005 HINT2Q9BX68 163 aa10□□□□□ -0.81
LTBR-208ENST00000541005 SRRQ9GZT4 340 aa10□□□□□ -0.81
LTBR-208ENST00000541005 MCUBQ9NWR8 336 aa10□□□□□ -0.81
LTBR-208ENST00000541005 A0A0B4J293 547 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
LTBR-208ENST00000541005 PPP5D1E7EU14 171 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 LGALS9O00182 355 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 CSN3P07498 182 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 IZUMO4Q1ZYL8 232 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 LHFPL5Q8TAF8 219 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
LTBR-208ENST00000541005 PRR25Q96S07 402 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 PEMTQ9UBM1 199 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 LSM4Q9Y4Z0 139 aaKnown RBP9.99□□□□□ -0.81
LTBR-208ENST00000541005 TMEM56-RWDD3S4R434 201 aa9.99□□□□□ -0.81
LTBR-208ENST00000541005 A0A0G2JRQ6 117 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 IGHV3-23P01764 117 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 SPNP16150 400 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 ARL3P36405 182 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 MECP2P51608 486 aaKnown RBP9.98□□□□□ -0.81
LTBR-208ENST00000541005 CLEC19AQ6UXS0 136 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 SELENOHQ8IZQ5 122 aaKnown RBP9.98□□□□□ -0.81
LTBR-208ENST00000541005 IL22RA2Q969J5 263 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 RRNAD1Q96FB5 475 aaKnown RBP9.98□□□□□ -0.81
LTBR-208ENST00000541005 PLEKHA3Q9HB20 300 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 S4R3C0 116 aa9.98□□□□□ -0.81
LTBR-208ENST00000541005 A8MWP6 167 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 K7EIM0 57 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 ST8SIA3O43173 380 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 GP9P14770 177 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 SUPT4H1P63272 117 aaKnown RBP9.97□□□□□ -0.81
LTBR-208ENST00000541005 TMEM187Q14656 261 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 SLC25A24Q6NUK1 477 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 SGPP2Q8IWX5 399 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 B9D2Q9BPU9 175 aa9.97□□□□□ -0.81
LTBR-208ENST00000541005 SLC25A21Q9BQT8 299 aaPredicted RBP9.97□□□□□ -0.81
LTBR-208ENST00000541005 COL7A1Q02388 2944 aa9.96□□□□□ -0.81
LTBR-208ENST00000541005 OR2C1O95371 312 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
LTBR-208ENST00000541005 FCGR2BP31994 310 aaPredicted RBP9.96□□□□□ -0.82
LTBR-208ENST00000541005 GPR183P32249 361 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 PVRIGQ6DKI7 326 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 ADAMTSL5Q6ZMM2 481 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 Q6ZRM9 215 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 HAPLN4Q86UW8 402 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 SLC35G3Q8N808 338 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 OR2K2Q8NGT1 345 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 OR52E5Q8NH55 327 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 RNASE11Q8TAA1 199 aaKnown RBP9.96□□□□□ -0.82
LTBR-208ENST00000541005 SCARB1Q8WTV0 552 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 SDHCQ99643 169 aaPredicted RBP9.96□□□□□ -0.82
LTBR-208ENST00000541005 KCNIP3Q9Y2W7 256 aa9.96□□□□□ -0.82
LTBR-208ENST00000541005 C2orf70A6NJV1 201 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 F8W735 103 aaPredicted RBP9.95□□□□□ -0.82
LTBR-208ENST00000541005 I3L2K1 104 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 TGOLN2O43493 480 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 LY86O95711 162 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 CLEC3BP05452 202 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 SRPXP78539 464 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 ERHP84090 104 aaKnown RBP9.95□□□□□ -0.82
LTBR-208ENST00000541005 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 TMEM268Q5VZI3 342 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 SPSB3Q6PJ21 355 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 BSCL2Q96G97 398 aaPredicted RBP9.95□□□□□ -0.82
LTBR-208ENST00000541005 PDCD10Q9BUL8 212 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 ZNF436Q9C0F3 470 aaPredicted RBP9.95□□□□□ -0.82
LTBR-208ENST00000541005 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.95□□□□□ -0.82
LTBR-208ENST00000541005 C21orf62Q9NYP8 219 aa9.95□□□□□ -0.82
LTBR-208ENST00000541005 A0A0B4J2A0 478 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 PIGBOS1A0A0B4J2F0 54 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 TMEM213A2RRL7 107 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 IFNA17P01571 189 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 ANXA3P12429 323 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 AKR1C4P17516 323 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 SPCS3P61009 180 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 RBMS2Q15434 407 aaKnown RBP9.94□□□□□ -0.82
LTBR-208ENST00000541005 BAK1Q16611 211 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 BSXQ3C1V8 233 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 FAM106AQ4KMX7 169 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 TMEM128Q5BJH2 165 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 NMSQ5H8A3 153 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 TRIQKQ629K1 86 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 LCN12Q6JVE5 192 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 PLET1Q6UQ28 207 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 GAR1Q9NY12 217 aaKnown RBP9.94□□□□□ -0.82
LTBR-208ENST00000541005 CACNG5Q9UF02 275 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 CACFD1Q9UGQ2 172 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms