RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
CD9-209ENST00000540891 ATG12O94817 140 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 IGLV1-51P01701 117 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 CSN3P07498 182 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 FAUP35544 74 aaKnown RBP12.87□□□□□ -0.35
CD9-209ENST00000540891 AP3S2P59780 193 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 BAK1Q16611 211 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 SLC25A24Q6NUK1 477 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 Q6ZRM9 215 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 SELENOHQ8IZQ5 122 aaKnown RBP12.87□□□□□ -0.35
CD9-209ENST00000540891 OR2C3Q8N628 320 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 CXorf58Q96LI9 332 aa12.87□□□□□ -0.35
CD9-209ENST00000540891 TRBV7-1A0A0A6YYK4 115 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
CD9-209ENST00000540891 OR2C1O95371 312 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 SPNP16150 400 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 ARL3P36405 182 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 MECP2P51608 486 aaKnown RBP12.86□□□□□ -0.35
CD9-209ENST00000540891 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
CD9-209ENST00000540891 DHODHQ02127 395 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 SPINK9Q5DT21 86 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 DEDD2Q8WXF8 326 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 GALNT14Q96FL9 552 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 SCGB3A2Q96PL1 93 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 PRR13Q9NZ81 148 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 THYN1Q9P016 225 aa12.86□□□□□ -0.35
CD9-209ENST00000540891 LSM4Q9Y4Z0 139 aaKnown RBP12.86□□□□□ -0.35
CD9-209ENST00000540891 DNAH9Q9NYC9 4486 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 TGP01266 2768 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 K7EIM0 57 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 CLEC3BP05452 202 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 TMEM187Q14656 261 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 TATDN3Q17R31 274 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 TMEM268Q5VZI3 342 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 ADAMTSL5Q6ZMM2 481 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 SGPP2Q8IWX5 399 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 ZNF114Q8NC26 417 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 VN1R17PQ8TDU5 208 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
CD9-209ENST00000540891 RRNAD1Q96FB5 475 aaKnown RBP12.85□□□□□ -0.35
CD9-209ENST00000540891 SIGLEC8Q9NYZ4 499 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
CD9-209ENST00000540891 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 F8W735 103 aaPredicted RBP12.84□□□□□ -0.35
CD9-209ENST00000540891 AKR1C4P17516 323 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 EDN2P20800 178 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 GPR183P32249 361 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 FAM219AQ8IW50 185 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 GPR146Q96CH1 333 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 PLEKHA3Q9HB20 300 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 ZC4H2Q9NQZ6 224 aa12.84□□□□□ -0.35
CD9-209ENST00000540891 INS-IGF2F8WCM5 200 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 LGALS9O00182 355 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 CYB5BO43169 146 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 LY86O95711 162 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 GP9P14770 177 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 ZNF57Q68EA5 555 aaPredicted RBP12.83□□□□□ -0.36
CD9-209ENST00000540891 SLC35G3Q8N808 338 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 OR1L6Q8NGR2 347 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 RNASE11Q8TAA1 199 aaKnown RBP12.83□□□□□ -0.36
CD9-209ENST00000540891 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 PEMTQ9UBM1 199 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 KCNIP3Q9Y2W7 256 aa12.83□□□□□ -0.36
CD9-209ENST00000540891 I3L2K1 104 aa12.82□□□□□ -0.36
CD9-209ENST00000540891 IFNA17P01571 189 aa12.82□□□□□ -0.36
CD9-209ENST00000540891 SLC25A21Q9BQT8 299 aaPredicted RBP12.82□□□□□ -0.36
CD9-209ENST00000540891 C21orf62Q9NYP8 219 aa12.82□□□□□ -0.36
CD9-209ENST00000540891 CACNG5Q9UF02 275 aa12.82□□□□□ -0.36
CD9-209ENST00000540891 A6NHS1 94 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 C2orf70A6NJV1 201 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 TGOLN2O43493 480 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
CD9-209ENST00000540891 TRIQKQ629K1 86 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 PVRIGQ6DKI7 326 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 ZNF414Q96IQ9 312 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 PDCD10Q9BUL8 212 aa12.81□□□□□ -0.36
CD9-209ENST00000540891 SORL1Q92673 2214 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 IZUMO1RA6ND01 250 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 OR2T8A6NH00 312 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 ADMP35318 185 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 CCR6P51684 374 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 NMSQ5H8A3 153 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 PLET1Q6UQ28 207 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 OR52E5Q8NH55 327 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 MISP3Q96FF7 219 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 B9D2Q9BPU9 175 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 CHRDL1Q9BU40 450 aa12.8□□□□□ -0.36
CD9-209ENST00000540891 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
CD9-209ENST00000540891 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms