RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TMEM272A0A1B0GTI8 110 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 OR2T8A6NH00 312 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 CYB5BO43169 146 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 ZNF207O43670 478 aaKnown RBP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 KBTBD11O94819 623 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 DIRAS3O95661 229 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 LIMS3P0CW19 117 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 LIMS4P0CW20 117 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 SPART-AS1P0CW21 52 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 CELP19835 753 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 DEFB131AP59861 70 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 RPS11P62280 158 aaKnown RBP eCLIP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 FLOT2Q14254 428 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 YIF1BQ5BJH7 314 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 PIK3CD-AS1Q5SR53 167 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 TTC23Q5W5X9 447 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 LEMD1Q68G75 181 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 XAF1Q6GPH4 301 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 TMPRSS11AQ6ZMR5 421 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 TRPT1Q86TN4 253 aaKnown RBP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 PUSL1Q8N0Z8 303 aaKnown RBP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 NKAIN3Q8N8D7 197 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 TMEM116Q8NCL8 245 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 CSNK1G2-AS1Q8NCQ2 148 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 OR6M1Q8NGM8 313 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 OR10J5Q8NHC4 309 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 SLC29A1Q99808 456 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 SRSF8Q9BRL6 282 aaKnown RBP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 HDHD3Q9BSH5 251 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 DCUN1D5Q9BTE7 237 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 TMEM59Q9BXS4 323 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 YTHDF1Q9BYJ9 559 aaKnown RBP3.25□□□□□ -1.89
SNHG1-214ENST00000540865 FAM107BQ9H098 131 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 BABAM2Q9NXR7 383 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 AASSQ9UDR5 926 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 ARL2BPQ9Y2Y0 163 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 PRELID3BQ9Y3B1 194 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 TMED3Q9Y3Q3 217 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 IGKV3-7A0A075B6H7 116 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 IGHV3OR16-8A0A075B7F1 116 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 TEX48A0A1B0GUV7 120 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 A0A1W2PPK0 400 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 TMEM189A5PLL7 270 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 TMEM14DPA8MWL7 114 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 J3KRW8 73 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 DNASE2O00115 360 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-214ENST00000540865 BET1O15155 118 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 FABP7O15540 132 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 FCGR3BO75015 233 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 REG1AP05451 166 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 FGF2P09038 288 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 HLA-GP17693 338 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 C4BPBP20851 252 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 CALB2P22676 271 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 XGP55808 180 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 RPL8P62917 257 aaKnown RBP3.24□□□□□ -1.89
SNHG1-214ENST00000540865 RELQ04864 619 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-214ENST00000540865 PLA2G7Q13093 441 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 OXA1LQ15070 435 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 IGSF11Q5DX21 431 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 OR10K2Q6IF99 312 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 VKORC1L1Q8N0U8 176 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 GBGT1Q8N5D6 347 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 C15orf53Q8NAA6 179 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 DUSP18Q8NEJ0 188 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 OR52I1Q8NGK6 324 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 OR4S2Q8NH73 311 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 ZNRF2Q8NHG8 242 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 GGHQ92820 318 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 DGCR14Q96DF8 476 aaKnown RBP3.24□□□□□ -1.89
SNHG1-214ENST00000540865 OR10C1Q96KK4 312 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 Q96MT0 163 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 ATG101Q9BSB4 218 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 CABLES2Q9BTV7 478 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 MS4A6AQ9H2W1 248 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 ARGLU1Q9NWB6 273 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-214ENST00000540865 C21orf62Q9NYP8 219 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 PTTG2Q9NZH5 202 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 HSF4Q9ULV5 492 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 MRPS7Q9Y2R9 242 aaKnown RBP3.24□□□□□ -1.89
SNHG1-214ENST00000540865 RBM7Q9Y580 266 aaKnown RBP3.24□□□□□ -1.89
SNHG1-214ENST00000540865 AGRNO00468 2067 aa3.24□□□□□ -1.89
SNHG1-214ENST00000540865 TRAV14DV4A0A0A6YYC5 116 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 A0A0A6YYD4 124 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 IGLC7A0M8Q6 106 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 FOXI3A8MTJ6 420 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-214ENST00000540865 SOCS1O15524 211 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 SLC22A5O76082 557 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 CDK1P06493 297 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 CTSGP08311 255 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 CD3GP09693 182 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 PSG1P11464 419 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 GABRB1P18505 474 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 CRHBPP24387 322 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 DCKP27707 260 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 TMEM50BP56557 158 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 OR2B8PP59922 312 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 QRFPP83859 136 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 UNC119Q13432 240 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms