RNA–Protein interactions for RNA: ENST00000540665.5

TTC28-AS1-221, TTC28 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TTC28-AS1, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-221ENST00000540665 ARL3P36405 182 aa12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 MECP2P51608 486 aaKnown RBP12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 DHODHQ02127 395 aa12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 IL34Q6ZMJ4 242 aa12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 FAM219AQ8IW50 185 aa12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 TOMM5Q8N4H5 51 aa12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 HINT2Q9BX68 163 aa12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 MCUBQ9NWR8 336 aa12.34□□□□□ -0.43
TTC28-AS1-221ENST00000540665 SORL1Q92673 2214 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 TEX13DA0A0J9YY54 714 aaPredicted RBP12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 PPP5D1E7EU14 171 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 INS-IGF2F8WCM5 200 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 LGALS9O00182 355 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 HSPE1P61604 102 aaKnown RBP12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SP6Q3SY56 376 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 DEFB121Q5J5C9 76 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 CLEC19AQ6UXS0 136 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 GPHB5Q86YW7 130 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 OR1P1Q8NH06 330 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 ZNF502Q8TBZ5 544 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 GLYATL2Q8WU03 294 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 RBPMSQ93062 196 aaKnown RBP12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 GALNT14Q96FL9 552 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 B9D2Q9BPU9 175 aa12.33□□□□□ -0.44
TTC28-AS1-221ENST00000540665 LY86O95711 162 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 CSN3P07498 182 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 GP9P14770 177 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SPNP16150 400 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 MFAP2P55001 183 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SGPP2Q8IWX5 399 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 IL22RA2Q969J5 263 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 RRNAD1Q96FB5 475 aaKnown RBP12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SRRQ9GZT4 340 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 PLEKHA3Q9HB20 300 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 S4R3C0 116 aa12.32□□□□□ -0.44
TTC28-AS1-221ENST00000540665 A0A0B4J293 547 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 A8MWP6 167 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 IGHV3-23P01764 117 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 AARDQ4LEZ3 155 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SLC25A24Q6NUK1 477 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 OR2K2Q8NGT1 345 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 LHFPL5Q8TAF8 219 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 PDCD10Q9BUL8 212 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 TMEM56-RWDD3S4R434 201 aa12.31□□□□□ -0.44
TTC28-AS1-221ENST00000540665 A0A0G2JRQ6 117 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 ST8SIA3O43173 380 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 OR2C1O95371 312 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 CLEC3BP05452 202 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 ERHP84090 104 aaKnown RBP12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 IZUMO4Q1ZYL8 232 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 LCN12Q6JVE5 192 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 KCNIP3Q9Y2W7 256 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 DNAH9Q9NYC9 4486 aa12.3□□□□□ -0.44
TTC28-AS1-221ENST00000540665 PIGBOS1A0A0B4J2F0 54 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 K7EIM0 57 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 HLA-AP01891 365 aaKnown RBP12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 GPR183P32249 361 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 FAM106AQ4KMX7 169 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 TMEM268Q5VZI3 342 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 HAPLN4Q86UW8 402 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SELENOHQ8IZQ5 122 aaKnown RBP12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SLC35G3Q8N808 338 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SCARB1Q8WTV0 552 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 BSCL2Q96G97 398 aaPredicted RBP12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SLC25A21Q9BQT8 299 aaPredicted RBP12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 GAR1Q9NY12 217 aaKnown RBP12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 C21orf62Q9NYP8 219 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
TTC28-AS1-221ENST00000540665 C2orf70A6NJV1 201 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 TGOLN2O43493 480 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 IFNA17P01571 189 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 FCGR2BP31994 310 aaPredicted RBP12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SUPT4H1P63272 117 aaKnown RBP12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 SRPXP78539 464 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 CD69Q07108 199 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 TMEM187Q14656 261 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 PLET1Q6UQ28 207 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 ZNF436Q9C0F3 470 aaPredicted RBP12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 CACFD1Q9UGQ2 172 aa12.28□□□□□ -0.44
TTC28-AS1-221ENST00000540665 F8W735 103 aaPredicted RBP12.27□□□□□ -0.45
TTC28-AS1-221ENST00000540665 I3L2K1 104 aa12.27□□□□□ -0.45
TTC28-AS1-221ENST00000540665 ANXA3P12429 323 aa12.27□□□□□ -0.45
TTC28-AS1-221ENST00000540665 ELLP55199 621 aaPredicted RBP12.27□□□□□ -0.45
TTC28-AS1-221ENST00000540665 ADAMTSL5Q6ZMM2 481 aa12.27□□□□□ -0.45
TTC28-AS1-221ENST00000540665 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.27□□□□□ -0.45
TTC28-AS1-221ENST00000540665 TECRQ9NZ01 308 aaKnown RBP12.27□□□□□ -0.45
TTC28-AS1-221ENST00000540665 A0A0B4J2A0 478 aa12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 TMEM213A2RRL7 107 aa12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 NAP1L6A6NFF2 107 aa12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 CORTO00230 105 aa12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 FOLR2P14207 255 aa12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 AKR1C4P17516 323 aa12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 SNCAP37840 140 aa12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 HOXA1P49639 335 aaPredicted RBP12.26□□□□□ -0.45
TTC28-AS1-221ENST00000540665 SPCS3P61009 180 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms