RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 GAR1Q9NY12 217 aaKnown RBP13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 CTSZQ9UBR2 303 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 ZFYVE26Q68DK2 2539 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 ACACBO00763 2458 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 RBFOX2O43251 390 aaKnown RBP eCLIP13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 SUMO1P63165 101 aaKnown RBP13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 LY6DQ14210 128 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 CYP2G1PQ6ZSU1 146 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 NABP2Q9BQ15 211 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 HILPDAQ9Y5L2 63 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 TCL1AP56279 114 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 SLC25A48Q6ZT89 311 aaKnown RBP13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 TPSG1Q9NRR2 321 aa13.94□□□□□ -0.18
EPB41L3-204ENST00000540638 B4DEV8 164 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 K7ENP7 123 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 UPK2O00526 184 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 LGALS4P56470 323 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 ARF6P62330 175 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 EFNB3Q15768 340 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 MIOXQ9UGB7 285 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 CNIH1O95406 144 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 CXorf1O96002 111 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 BLNKQ8WV28 456 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 NPIPB3Q92617 1050 aa13.93□□□□□ -0.18
EPB41L3-204ENST00000540638 TRBV23-1A0A0A0MS06 115 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 SLC17A3O00476 420 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 NDUFA2O43678 99 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 MOSP00540 346 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 NUP37Q8NFH4 326 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 OR1L8Q8NGR8 309 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 FOLR2P14207 255 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 PRR27Q6MZM9 219 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 ZNF114Q8NC26 417 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 OR2T10Q8NGZ9 312 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 SGMS2Q8NHU3 365 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 TRAV5A0A0B4J249 113 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 ZNF705GA8MUZ8 300 aaPredicted RBP13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 E7EUB6 86 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 S100A8P05109 93 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 CRYBB3P26998 211 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 GCHFRP30047 84 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 OR5I1Q13606 314 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 S4R3C0 116 aa13.92□□□□□ -0.18
EPB41L3-204ENST00000540638 NPPCP23582 126 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 APOBEC3AP31941 199 aaPredicted RBP13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 ERVFC1-1P60608 527 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 KCNIP4Q6PIL6 250 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 DDB2Q92466 427 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 A0A087WWC5 75 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 CGB3P0DN86 165 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 CGB7P0DN87 165 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 ZNF90Q03938 601 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 RPEQ96AT9 228 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 COX7A2P2O60397 106 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 MPDU1O75352 247 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 CNTFRP26992 372 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 OR4C13Q8NGP0 309 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 RITA1Q96K30 269 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 PFDN5Q99471 154 aa13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 YTHDF2Q9Y5A9 579 aaKnown RBP13.91□□□□□ -0.18
EPB41L3-204ENST00000540638 LINC00869P0C866 280 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 RND2P52198 227 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 VMA21Q3ZAQ7 101 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 KDF1Q8NAX2 398 aaPredicted RBP13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 FAM222BQ8WU58 562 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 KCNIP2Q9NS61 270 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 TMEM14BQ9NUH8 114 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 METTL1Q9UBP6 276 aaKnown RBP13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 FABP1P07148 127 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 NUBP1P53384 320 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 FXYD3Q14802 87 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 DIRC2Q96SL1 478 aa13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 GSX1Q9H4S2 264 aaPredicted RBP13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 ZNF430Q9H8G1 570 aaPredicted RBP13.9□□□□□ -0.18
EPB41L3-204ENST00000540638 XKRY2A2RUG3 117 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 TMPRSS3P57727 454 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 UBE2L3P68036 154 aaKnown RBP13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 PRR31Q5SQ13 230 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 FOXA2Q9Y261 457 aaPredicted RBP13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 SHISA9B4DS77 424 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 H0YJW9 148 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 UBE2CO00762 179 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 SOD3P08294 240 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 GAMTQ14353 236 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 C9orf152Q5JTZ5 239 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 OR1B1Q8NGR6 318 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 OR4X1Q8NH49 305 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 ASH1LQ9NR48 2969 aaKnown RBP13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 SSTP61278 116 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 PRCDQ00LT1 54 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 PNKDQ8N490 385 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 TCEAL7Q9BRU2 100 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 FKBP11Q9NYL4 201 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 WASHC3Q9Y3C0 194 aa13.89□□□□□ -0.19
EPB41L3-204ENST00000540638 PDE6DO43924 150 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms