RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PDCD6O75340 191 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 CLDN14O95500 239 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 SCTP09683 121 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 IGFBP2P18065 325 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 RPL31P62899 125 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM249Q2WGJ8 235 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 FAM120AOSQ5T036 256 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 SPATA31B1PQ5VZV4 182 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 BPIFA4PQ86YQ2 179 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 OR11H1Q8NG94 326 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 OR11H2Q8NH07 326 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 TXNDC17Q9BRA2 123 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 C19orf24Q9BVV8 132 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 CLCF1Q9UBD9 225 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 FRYQ5TBA9 3013 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 SH2D7A6NKC9 451 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 SNAI2O43623 268 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 TUSC2O75896 110 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 IGKV1-5P01602 117 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 WT1P19544 449 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 FBXW4P57775 412 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 HERV-K104P63124 156 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 KIR3DS1Q14943 382 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 OSR2Q8N2R0 312 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 NEU4Q8WWR8 484 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 SPSB4Q96A44 273 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM191AQ9H0A3 160 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 OR2D2Q9H210 308 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 KCNIP1Q9NZI2 227 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 IGKV1-12A0A0C4DH73 117 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 C9JCJ5 164 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 ISLRO14498 428 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 NKX2-8O15522 239 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 IGKV1D-12P01611 117 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 CELA3AP09093 270 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 FXYD3Q14802 87 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 FOXI2Q6ZQN5 318 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 H1FNTQ75WM6 255 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 RPS19BP1Q86WX3 136 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM251Q8N6I4 163 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 PCSK5Q92824 1860 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 RAB37Q96AX2 223 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 MS4A6AQ9H2W1 248 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 PSG8Q9UQ74 426 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 HILPDAQ9Y5L2 63 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 LY96Q9Y6Y9 160 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 APC2O95996 2303 aa7.86□□□□□ -1.15
CTNNA1-243ENST00000540387 F5H5K5 113 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 ARL14EPLP0DKL9 152 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 MGST1P10620 155 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 GRB2P62993 217 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 KLF5Q13887 457 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 NRN1LQ496H8 165 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 FA2HQ7L5A8 372 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 TPRX1Q8N7U7 411 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 RNASE7Q9H1E1 156 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 MRPL16Q9NX20 251 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 BOKQ9UMX3 212 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 YTHDF2Q9Y5A9 579 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 A0A1W2PPV4 95 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 NPIPB13A6NJU9 1138 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 NPIPB4C9JG80 1138 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 COX8AP10176 69 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 RPS16P62249 146 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 RPL8P62917 257 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 ADAMTSL5Q6ZMM2 481 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 CACNG8Q8WXS5 425 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 RAB1CQ92928 201 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 SAP30LQ9HAJ7 183 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 JPT1Q9UK76 154 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 ACACAQ13085 2346 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 PIGBOS1A0A0B4J2F0 54 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 J3QR89 54 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 HBZP02008 142 aa7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 INO80CQ6PI98 192 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 MCRIP2Q9BUT9 160 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-243ENST00000540387 DMXL2Q8TDJ6 3036 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 MED13Q9UHV7 2174 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 TRGV10A0A0A0MS01 117 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 FBLL1A6NHQ2 334 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 PMS2P5A8MQ11 134 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 NPIPA3F8WFD2 350 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 RRHO14718 337 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 OR7C1O76099 320 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 BRI3O95415 125 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 FABP2P12104 132 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 CLRN1P58418 232 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 ZNF718Q3SXZ3 478 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 DOLPP1Q86YN1 238 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 URB1-AS1Q96HZ7 61 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 PMCHL2Q9BQD1 86 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 ZNF331Q9NQX6 463 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 SERTAD4Q9NUC0 356 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 ZNF391Q9UJN7 358 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 ZNF257Q9Y2Q1 563 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 ATP23Q9Y6H3 246 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 NCOR2Q9Y618 2525 aa7.84□□□□□ -1.15
CTNNA1-243ENST00000540387 IGKV1-6A0A0C4DH72 117 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms