RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 GPR183P32249 361 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 MECP2P51608 486 aaKnown RBP11.45□□□□□ -0.58
UBE3B-212ENST00000540230 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 Q8N402 240 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 GLYATL2Q8WU03 294 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 CXorf58Q96LI9 332 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 TMEM56Q96MV1 263 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 B9D2Q9BPU9 175 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 NAA60Q9H7X0 242 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 MCUBQ9NWR8 336 aa11.45□□□□□ -0.58
UBE3B-212ENST00000540230 IZUMO1RA6ND01 250 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 CRYM-AS1A6NIL9 109 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 CLEC3BP05452 202 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 S100A5P33763 92 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 HSPE1P61604 102 aaKnown RBP11.44□□□□□ -0.58
UBE3B-212ENST00000540230 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 CD69Q07108 199 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 TATDN3Q17R31 274 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 Q6ZRM9 215 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 TMEM222Q9H0R3 208 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 PRR13Q9NZ81 148 aa11.44□□□□□ -0.58
UBE3B-212ENST00000540230 TRBV7-1A0A0A6YYK4 115 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 IGHV3-35A0A0C4DH35 117 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 TEX13DA0A0J9YY54 714 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-212ENST00000540230 F8W735 103 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-212ENST00000540230 K7EIM0 57 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 ST8SIA3O43173 380 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 CDS2O95674 445 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 FAM209BQ5JX69 171 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 OR2C3Q8N628 320 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 CACNG8Q8WXS5 425 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 SIGLEC8Q9NYZ4 499 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 THYN1Q9P016 225 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 PEMTQ9UBM1 199 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
UBE3B-212ENST00000540230 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
UBE3B-212ENST00000540230 UNQ9165/PRO28630Q6UXU0 137 aa11.42□□□□□ -0.58
UBE3B-212ENST00000540230 GPHB5Q86YW7 130 aa11.42□□□□□ -0.58
UBE3B-212ENST00000540230 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
UBE3B-212ENST00000540230 VN1R17PQ8TDU5 208 aa11.42□□□□□ -0.58
UBE3B-212ENST00000540230 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
UBE3B-212ENST00000540230 SRRQ9GZT4 340 aa11.42□□□□□ -0.58
UBE3B-212ENST00000540230 SCP2D1Q9UJQ7 156 aa11.42□□□□□ -0.58
UBE3B-212ENST00000540230 ETV6P41212 452 aa11.41□□□□□ -0.58
UBE3B-212ENST00000540230 DCTN2Q13561 401 aaKnown RBP11.41□□□□□ -0.58
UBE3B-212ENST00000540230 Q8N1Y9 231 aa11.41□□□□□ -0.58
UBE3B-212ENST00000540230 TOMM5Q8N4H5 51 aa11.41□□□□□ -0.58
UBE3B-212ENST00000540230 OR1P1Q8NH06 330 aa11.41□□□□□ -0.58
UBE3B-212ENST00000540230 PLEKHA3Q9HB20 300 aa11.41□□□□□ -0.58
UBE3B-212ENST00000540230 SMAD5-AS1Q9Y6J3 95 aa11.41□□□□□ -0.58
UBE3B-212ENST00000540230 TMEM213A2RRL7 107 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 OR2T8A6NH00 312 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 LGALS9O00182 355 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 TGOLN2O43493 480 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 B3GALNT1O75752 331 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 FOLR2P14207 255 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 SUPT4H1P63272 117 aaKnown RBP11.4□□□□□ -0.58
UBE3B-212ENST00000540230 TMEM187Q14656 261 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 TMEM268Q5VZI3 342 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 ZNF114Q8NC26 417 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 RNASE11Q8TAA1 199 aaKnown RBP11.4□□□□□ -0.58
UBE3B-212ENST00000540230 RBPMSQ93062 196 aaKnown RBP11.4□□□□□ -0.58
UBE3B-212ENST00000540230 RRNAD1Q96FB5 475 aaKnown RBP11.4□□□□□ -0.58
UBE3B-212ENST00000540230 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 ASCL2Q99929 193 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 CHRDL1Q9BU40 450 aa11.4□□□□□ -0.58
UBE3B-212ENST00000540230 ZNF320A2RRD8 509 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 I3L2K1 104 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 CYB5BO43169 146 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 ATG12O94817 140 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 IFNA17P01571 189 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 IGHV3-48P01763 117 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 AKR1C4P17516 323 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 BAK1Q16611 211 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 CD300EQ496F6 205 aaPredicted RBP11.4□□□□□ -0.59
UBE3B-212ENST00000540230 PLET1Q6UQ28 207 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 GPR146Q96CH1 333 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 MISP3Q96FF7 219 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 GALNT14Q96FL9 552 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 SDHCQ99643 169 aaPredicted RBP11.4□□□□□ -0.59
UBE3B-212ENST00000540230 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.59
UBE3B-212ENST00000540230 A8MWP6 167 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 ADMP35318 185 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 DHODHQ02127 395 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 TM4SF20Q53R12 229 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 SPANXN2Q5MJ10 180 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 SGPP2Q8IWX5 399 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 SLC35G3Q8N808 338 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 UBAC2Q8NBM4 344 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 TMEM56-RWDD3S4R434 201 aa11.39□□□□□ -0.59
UBE3B-212ENST00000540230 MT-CO2P00403 227 aa11.38□□□□□ -0.59
UBE3B-212ENST00000540230 CBLN1P23435 193 aa11.38□□□□□ -0.59
UBE3B-212ENST00000540230 FAUP35544 74 aaKnown RBP11.38□□□□□ -0.59
UBE3B-212ENST00000540230 AP3S2P59780 193 aa11.38□□□□□ -0.59
UBE3B-212ENST00000540230 ERHP84090 104 aaKnown RBP11.38□□□□□ -0.59
UBE3B-212ENST00000540230 DEFB114Q30KQ6 69 aa11.38□□□□□ -0.59
UBE3B-212ENST00000540230 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
UBE3B-212ENST00000540230 LCN12Q6JVE5 192 aa11.38□□□□□ -0.59
UBE3B-212ENST00000540230 OR1L6Q8NGR2 347 aa11.38□□□□□ -0.59
UBE3B-212ENST00000540230 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms