RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SNAI2O43623 268 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 REG1AP05451 166 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 COTL1Q14019 142 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 ZNF146Q15072 292 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 MLANAQ16655 118 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 CPAMD8Q8IZJ3 1885 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 IGKV3D-15A0A087WSY6 115 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 IGHV1-2P23083 117 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 S100A7P31151 101 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 INO80CQ6PI98 192 aaPredicted RBP10.76□□□□□ -0.69
MSH6-210ENST00000540021 LINC00479Q96M42 142 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 PAXXQ9BUH6 204 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 RPL8P62917 257 aaKnown RBP10.75□□□□□ -0.69
MSH6-210ENST00000540021 LEMD1Q68G75 181 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 WDR82Q6UXN9 313 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 PMCHL2Q9BQD1 86 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 TRAV5A0A0B4J249 113 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 A0A1W2PRD5 423 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 A0A1W2PRF3 423 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 A0A1W2PRM7 423 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 TYMSP04818 313 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 COL8A2P25067 703 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 C10orf113Q5VZT2 155 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 VWA1Q6PCB0 445 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 PDPNQ86YL7 162 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 OR9G1Q8NH87 305 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 TRBV20OR9-2A0A075B6H5 130 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 ZNF324O75467 553 aaPredicted RBP10.75□□□□□ -0.69
MSH6-210ENST00000540021 HTR1DP28221 377 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 SUB1P53999 127 aaKnown RBP eCLIP10.75□□□□□ -0.696e-8■■■□□ 14.9
MSH6-210ENST00000540021 COA6Q5JTJ3 125 aaKnown RBP10.75□□□□□ -0.69
MSH6-210ENST00000540021 FAM214BQ7L5A3 538 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 ITLN1Q8WWA0 313 aa10.75□□□□□ -0.69
MSH6-210ENST00000540021 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
MSH6-210ENST00000540021 IGHV3-72A0A0B4J1Y9 119 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 PYYP10082 97 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 HCP5Q6MZN7 132 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 PGLYRP4Q96LB8 373 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 ZPBPQ9BS86 351 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 DCAF16Q9NXF7 216 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 CLEC5AQ9NY25 188 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 PRNDQ9UKY0 176 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 SPTAN1Q13813 2472 aaKnown RBP10.74□□□□□ -0.69
MSH6-210ENST00000540021 IGLV2-14P01704 120 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 KLF3P57682 345 aaPredicted RBP10.74□□□□□ -0.69
MSH6-210ENST00000540021 RPL15P61313 204 aaKnown RBP10.74□□□□□ -0.69
MSH6-210ENST00000540021 GPX1P07203 203 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 CECR9P0C854 216 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 KIR2DS2P43631 304 aa10.74□□□□□ -0.69
MSH6-210ENST00000540021 MBNL3Q9NUK0 354 aaKnown RBP10.74□□□□□ -0.69
MSH6-210ENST00000540021 ABCA4P78363 2273 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 TNFAIP6P98066 277 aaPredicted RBP10.73□□□□□ -0.69
MSH6-210ENST00000540021 MORN2Q502X0 79 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 Q8NFD4 153 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 SARAFQ96BY9 339 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 PGPA6NDG6 321 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 MLNRO43193 412 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 GFRA3O60609 400 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 P01737 135 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 GNG5P63218 68 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 CCL8P80075 99 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 COX19Q49B96 90 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 NPIPB3Q92617 1050 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 SAP30LQ9HAJ7 183 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 PRDM6Q9NQX0 595 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 CT45A6P0DMU7 189 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 CT45A5P0DMU8 189 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 CT45A7P0DMV0 189 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 UQCRFS1P47985 274 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 DAZAP2Q15038 168 aaPredicted RBP10.73□□□□□ -0.69
MSH6-210ENST00000540021 CT45A1Q5HYN5 189 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 CT45A3Q8NHU0 189 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 MCRIP2Q9BUT9 160 aaKnown RBP10.73□□□□□ -0.69
MSH6-210ENST00000540021 JPT1Q9UK76 154 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 APC2O95996 2303 aa10.73□□□□□ -0.69
MSH6-210ENST00000540021 NPIPB11E5RHQ5 1161 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 M0QZ24 198 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 RCHY1Q96PM5 261 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 MOSP00540 346 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 HIST1H1EP10412 219 aaKnown RBP10.72□□□□□ -0.69
MSH6-210ENST00000540021 COL8A1P27658 744 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 MAJINQ3KP22 176 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 C1orf174Q8IYL3 243 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 OR8B3Q8NGG8 313 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 TMSB15BA0A087X1C1 80 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 TMEM11P17152 192 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 LGALS4P56470 323 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 PEAR1Q5VY43 1037 aaPredicted RBP10.72□□□□□ -0.69
MSH6-210ENST00000540021 TCF24Q7RTU0 167 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 PRSS3P2Q8NHM4 247 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 CCL17Q92583 94 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 CHRDL1Q9BU40 450 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 CDC42EP3Q9UKI2 254 aa10.72□□□□□ -0.69
MSH6-210ENST00000540021 SAA2-SAA4A0A096LPE2 208 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms