RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 P2RY6Q15077 328 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 CRIP3Q6Q6R5 217 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 PERPQ96FX8 193 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 CRIM1Q9NZV1 1036 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 SLC25A10Q9UBX3 287 aaPredicted RBP8.36□□□□□ -1.07
TRAF1-202ENST00000540010 UFC1Q9Y3C8 167 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 AMMECR1Q9Y4X0 333 aaPredicted RBP8.36□□□□□ -1.07
TRAF1-202ENST00000540010 TM4SF5O14894 197 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 SLC25A17O43808 307 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 RAMP3O60896 148 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 GCHFRP30047 84 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 PRRX1P54821 245 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 GCSAMLQ5JQS6 135 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 PLPPR1Q8TBJ4 325 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 TXNDC17Q9BRA2 123 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 SCNM1Q9BWG6 230 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 COA4Q9NYJ1 87 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 A0A087WWC5 75 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 A8MWL6 223 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 LILRA1O75019 489 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 NDUFS6O75380 124 aaKnown RBP8.35□□□□□ -1.07
TRAF1-202ENST00000540010 ZNF738Q8NE65 137 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 TMEM171Q8WVE6 324 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 AUP1Q9Y679 476 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 CORTO00230 105 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 HLA-DQA1P01909 254 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 UQCRFS1P47985 274 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 PSG7Q13046 419 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 OR13A1Q8NGR1 328 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 NEU1Q99519 415 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 CEACAM4O75871 244 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 RPL8P62917 257 aaKnown RBP8.35□□□□□ -1.07
TRAF1-202ENST00000540010 MMDQ15546 238 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 OR4B1Q8NGF8 309 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 OR4D5Q8NGN0 318 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 NPIPB3Q92617 1050 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 HIST1H2BLQ99880 126 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 HYPMO75409 117 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 C8orf88P0DMB2 117 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 TMUB1Q9BVT8 246 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 UQCR10Q9UDW1 63 aa8.35□□□□□ -1.07
TRAF1-202ENST00000540010 CD33P20138 364 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 CD40P25942 277 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 LBHQ53QV2 105 aaPredicted RBP8.34□□□□□ -1.07
TRAF1-202ENST00000540010 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 ASCL4Q6XD76 172 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 Q6ZS92 163 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 STXBP6Q8NFX7 210 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 ABHD17AQ96GS6 310 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 DNAJC4Q9NNZ3 241 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 CA2P00918 260 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
TRAF1-202ENST00000540010 PCP4P48539 62 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 NMUP48645 174 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 C1orf185Q5T7R7 199 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 SLC35E4Q6ICL7 350 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 BPIFA4PQ86YQ2 179 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 TRAV24A0A0B4J272 114 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 IGFBP2P18065 325 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 RIGQ13278 110 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 MST1LQ2TV78 715 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 KHDC1LQ5JSQ8 128 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 MS4A5Q9H3V2 200 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 TNFRSF19Q9NS68 423 aa8.34□□□□□ -1.07
TRAF1-202ENST00000540010 PPIAL4EA0A075B759 164 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 FOXI3A8MTJ6 420 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 PPIAL4DF5H284 164 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 K7EM74 188 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 VENTXO95231 258 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 IL6RP08887 468 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 PPIAL4FP0DN26 164 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 IGFL3Q6UXB1 125 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 PPIAL4AQ9Y536 164 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 GTF3C1Q12789 2109 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 MED12LQ86YW9 2145 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 GFRA3O60609 400 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 ST6GALNAC6Q969X2 333 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 THYN1Q9P016 225 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 IGHV3-35A0A0C4DH35 117 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 DPRXA6NFQ7 191 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 F5H697 171 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 CECR9P0C854 216 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 MAS1LP35410 378 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 RPL27AP46776 148 aaKnown RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 TAS2R60P59551 318 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 TMEM177Q53S58 311 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 ERASQ7Z444 233 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 OR8B3Q8NGG8 313 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 RBM14Q96PK6 669 aaKnown RBP8.33□□□□□ -1.08
TRAF1-202ENST00000540010 OR8B2Q96RD0 313 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 PLSCR4Q9NRQ2 329 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 ANAPC10Q9UM13 185 aa8.33□□□□□ -1.08
TRAF1-202ENST00000540010 TBL2Q9Y4P3 447 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms