RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ZNF787Q6DD87 383 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 CLEC2AQ6UVW9 174 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 KIAA1456Q9P272 454 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 RBFOX3A6NFN3 312 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 INS-IGF2F8WCM5 200 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 REG1AP05451 166 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 OR13C7P0DN81 318 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 RPL27AP46776 148 aaKnown RBP17.99■□□□□ 0.47
HOMER3-204ENST00000539827 FAM122CQ6P4D5 195 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 SLC25A22Q9H936 323 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 SLC39A9Q9NUM3 307 aa17.99■□□□□ 0.47
HOMER3-204ENST00000539827 TRAV1-1A0A0B4J248 108 aa17.98■□□□□ 0.47
HOMER3-204ENST00000539827 DNASE2O00115 360 aaPredicted RBP17.98■□□□□ 0.47
HOMER3-204ENST00000539827 MPDU1O75352 247 aa17.98■□□□□ 0.47
HOMER3-204ENST00000539827 ACTL6BO94805 426 aa17.98■□□□□ 0.47
HOMER3-204ENST00000539827 MBP02144 154 aa17.98■□□□□ 0.47
HOMER3-204ENST00000539827 ATF4P18848 351 aaPredicted RBP17.98■□□□□ 0.47
HOMER3-204ENST00000539827 ATP5IP56385 69 aaPredicted RBP17.98■□□□□ 0.47
HOMER3-204ENST00000539827 RNF5Q99942 180 aa17.98■□□□□ 0.47
HOMER3-204ENST00000539827 GGTLC1Q9BX51 225 aa17.98■□□□□ 0.47
HOMER3-204ENST00000539827 MYO18BQ8IUG5 2567 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 MAP1LC3B2A6NCE7 125 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 VWC2LB2RUY7 222 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 HMGB3O15347 200 aaKnown RBP17.97■□□□□ 0.47
HOMER3-204ENST00000539827 PLXNB1O43157 2135 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 SNAPINO95295 136 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 PLGLAQ15195 96 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 FBLN7Q53RD9 439 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 MIC13Q5XKP0 118 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 PPP1R27Q86WC6 154 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 MAP1LC3BQ9GZQ8 125 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 LSM4Q9Y4Z0 139 aaKnown RBP17.97■□□□□ 0.47
HOMER3-204ENST00000539827 IGHV4-30-2A0A087WSY4 118 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 FCN1O00602 326 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 MMDQ15546 238 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 GCSAMLQ5JQS6 135 aa17.97■□□□□ 0.47
HOMER3-204ENST00000539827 WNK2Q9Y3S1 2297 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 NDUFS8O00217 210 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 APELAP0DMC3 54 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 DEFA4P12838 97 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 HES1Q14469 280 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 HABP2Q14520 560 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-204ENST00000539827 ACOT6Q3I5F7 207 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-204ENST00000539827 MINOS1Q5TGZ0 78 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 TEPPQ6URK8 271 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 SSMEM1Q8WWF3 244 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 P2RX4Q99571 388 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 MINOS1-NBL1R4GNA1 71 aa17.96■□□□□ 0.47
HOMER3-204ENST00000539827 COL12A1Q99715 3063 aa17.96■□□□□ 0.46
HOMER3-204ENST00000539827 MOSP00540 346 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 SNRNP70P08621 437 aaKnown RBP17.95■□□□□ 0.46
HOMER3-204ENST00000539827 MAS1LP35410 378 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 OPRK1P41145 380 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 COMPP49747 757 aaPredicted RBP17.95■□□□□ 0.46
HOMER3-204ENST00000539827 EAF1Q96JC9 268 aaPredicted RBP17.95■□□□□ 0.46
HOMER3-204ENST00000539827 ACTR3CQ9C0K3 210 aaPredicted RBP17.95■□□□□ 0.46
HOMER3-204ENST00000539827 GNG13Q9P2W3 67 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 PXMP4Q9Y6I8 212 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 CTXND1A0A1B0GTU2 59 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 IGLC7A0M8Q6 106 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 YIF1AO95070 293 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 CD69Q07108 199 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 RXFP4Q8TDU9 374 aa17.95■□□□□ 0.46
HOMER3-204ENST00000539827 FNDC10F2Z333 226 aa17.94■□□□□ 0.46
HOMER3-204ENST00000539827 COL8A1P27658 744 aa17.94■□□□□ 0.46
HOMER3-204ENST00000539827 UBE2E1P51965 193 aa17.94■□□□□ 0.46
HOMER3-204ENST00000539827 GAMTQ14353 236 aa17.94■□□□□ 0.46
HOMER3-204ENST00000539827 ICAM4Q14773 271 aa17.94■□□□□ 0.46
HOMER3-204ENST00000539827 NBR2O15453 112 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 AREGP15514 252 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 SUB1P53999 127 aaKnown RBP eCLIP17.93■□□□□ 0.46
HOMER3-204ENST00000539827 CCDC144NLQ6NUI1 221 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 CLRN3Q8NCR9 226 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 POLR3KQ9Y2Y1 108 aaPredicted RBP17.93■□□□□ 0.46
HOMER3-204ENST00000539827 ZFP92A6NM28 416 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 OOSP1A8MZH6 123 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 CYB5BO43169 146 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 SSBP2P81877 361 aaPredicted RBP17.93■□□□□ 0.46
HOMER3-204ENST00000539827 ZNF506Q5JVG8 444 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 C19orf35Q6ZS72 473 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 OR2T6Q8NHC8 308 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 RAB24Q969Q5 203 aa17.93■□□□□ 0.46
HOMER3-204ENST00000539827 TACC2O95359 2948 aa17.92■□□□□ 0.46
HOMER3-204ENST00000539827 FBP1P09467 338 aa17.92■□□□□ 0.46
HOMER3-204ENST00000539827 SLC16A13Q7RTY0 426 aa17.92■□□□□ 0.46
HOMER3-204ENST00000539827 TMEM144Q7Z5S9 345 aa17.92■□□□□ 0.46
HOMER3-204ENST00000539827 OR2T10Q8NGZ9 312 aa17.92■□□□□ 0.46
HOMER3-204ENST00000539827 SLC35B3Q9H1N7 401 aa17.92■□□□□ 0.46
HOMER3-204ENST00000539827 TMPRSS5Q9H3S3 457 aa17.92■□□□□ 0.46
HOMER3-204ENST00000539827 TBL2Q9Y4P3 447 aaKnown RBP17.92■□□□□ 0.46
HOMER3-204ENST00000539827 LOC102723971A0A1B0GUV8 181 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 FAM74A7A6NL05 159 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 NUPL2O15504 423 aaKnown RBP17.91■□□□□ 0.46
HOMER3-204ENST00000539827 CDC34P49427 236 aaPredicted RBP17.91■□□□□ 0.46
HOMER3-204ENST00000539827 RAB31Q13636 194 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 FAM74A3Q4VXF1 159 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 NPBQ8NG41 125 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 TEX22C9J3V5 150 aa17.91■□□□□ 0.46
HOMER3-204ENST00000539827 GPX4P36969 197 aaPredicted RBP17.91■□□□□ 0.46
HOMER3-204ENST00000539827 B2MP61769 119 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms