RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 A0A087WWC5 75 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 IGKV1D-43A0A0B4J1Z2 117 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 A0A1B0GUT8 65 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM262E9PQX1 116 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 TGFBR3LH3BV60 316 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 IGFBP2P18065 325 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 HINT1P49773 126 aaPredicted RBP5.46□□□□□ -1.54
LSAMP-207ENST00000539563 CFHR1Q03591 330 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 TCF23Q7RTU1 214 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 RCC1LQ96I51 464 aaKnown RBP5.46□□□□□ -1.54
LSAMP-207ENST00000539563 NLRC5Q86WI3 1866 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 A0A0G2JMM0 328 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 A0A1W2PPB8 328 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 A0A1W2PRS3 328 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 KIR3DP1A8MWS1 328 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 TCF21O43680 179 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 DNAL4O96015 105 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 IGHV3-48P01763 117 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 CSRP1P21291 193 aaKnown RBP5.46□□□□□ -1.54
LSAMP-207ENST00000539563 LEMD1Q68G75 181 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 NEUROG1Q92886 237 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 ABHD17AQ96GS6 310 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 JMJD8Q96S16 334 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 AICDAQ9GZX7 198 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 FAM90A9PA6NNJ1 464 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 MYOD1P15172 320 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 C9orf106Q8NAJ2 232 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 PRDM6Q9NQX0 595 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 CGAP01215 116 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 CCL1P22362 96 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 OR52E5Q8NH55 327 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 GTF3AQ92664 365 aaKnown RBP5.45□□□□□ -1.54
LSAMP-207ENST00000539563 ZNF414Q96IQ9 312 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 DPRXA6NFQ7 191 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 C17orf98A8MV24 154 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 PROB1E7EW31 1015 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 IGKV3-20P01619 116 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 LTBRP36941 435 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 FAM74A4Q5TZK3 123 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 TNFRSF14Q92956 283 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 OTORQ9NRC9 128 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 FBLN5Q9UBX5 448 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 EFNB1P98172 346 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM183AQ8IXX5 376 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 PRELID3AQ96N28 172 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 IGHV3OR16-10A0A075B7F0 116 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 ZFP36L1Q07352 338 aaKnown RBP5.45□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM144Q7Z5S9 345 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 DUX3Q96PT4 197 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM160Q9NX00 188 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 SEMA5BQ9P283 1151 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 TRBV6-7A0A0A0MS04 114 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 A0A1B0GTI1 187 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 C19orf67A6NJJ6 358 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 UPK2O00526 184 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 KIAA1644Q3SXP7 199 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 MORN2Q502X0 79 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 WNT10AQ9GZT5 417 aa5.45□□□□□ -1.54
LSAMP-207ENST00000539563 H3BRM9 83 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SUMO2P61956 95 aaKnown RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 ASCL2Q99929 193 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 MRPL13Q9BYD1 178 aaKnown RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 RPP21Q9H633 154 aaKnown RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 NUP210Q8TEM1 1887 aaPredicted RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 A1L4Q6 167 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 C15orf61A6NNL5 157 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 RRHO14718 337 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 IGHV3-23P01764 117 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 GPR183P32249 361 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 TFF3Q07654 80 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 PVRIGQ6DKI7 326 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 MRPL20Q9BYC9 149 aaKnown RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 KLK15Q9H2R5 256 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 CARHSP1Q9Y2V2 147 aaKnown RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SDK2Q58EX2 2172 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SCO2A0A1W2PP80 73 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 NBR2O15453 112 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 LEPP41159 167 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 CLEC19AQ6UXS0 136 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 CIARTQ8N365 385 aaPredicted RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 OR13A1Q8NGR1 328 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 WBP1Q96G27 269 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 Q9H3A6 140 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 IZUMO1RA6ND01 250 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 IL18BPO95998 194 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 VWCEQ96DN2 955 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 C7orf69Q9H7B7 122 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 MSGN1A6NI15 193 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 ERVH48-1M5A8F1 160 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SIGLEC5O15389 551 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SOD3P08294 240 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 TTC32Q5I0X7 151 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 FER1L6-AS1Q8NA97 138 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 TANC1Q9C0D5 1861 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 KIF26AQ9ULI4 1882 aaPredicted RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 PLXNA4Q9HCM2 1894 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 VDAC2P45880 294 aaPredicted RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 DSCR9P59020 149 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms