RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 MOSP00540 346 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 GCGP01275 180 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 IGHG2P01859 326 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 OPN1MWP04001 364 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 OPN1MW2P0DN77 364 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 OPN1MW3P0DN78 364 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 HIST1H1DP16402 221 aaKnown RBP5.67□□□□□ -1.5
LMO3-220ENST00000539232 CD1BP29016 333 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 OR2B8PP59922 312 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 CFHR3Q02985 330 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 TRAT1Q6PIZ9 186 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 C16orf82Q7Z2V1 217 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 LYG2Q86SG7 212 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 OR2T10Q8NGZ9 312 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 GPX8Q8TED1 209 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 CASTOR1Q8WTX7 329 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 PPP1R1CQ8WVI7 109 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 PTX4Q96A99 478 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 YPEL4Q96NS1 127 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 URM1Q9BTM9 101 aaKnown RBP5.67□□□□□ -1.5
LMO3-220ENST00000539232 ACTR3CQ9C0K3 210 aaPredicted RBP5.67□□□□□ -1.5
LMO3-220ENST00000539232 KLK15Q9H2R5 256 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 TPSG1Q9NRR2 321 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 NECAP2Q9NVZ3 263 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 WSB1Q9Y6I7 421 aa5.67□□□□□ -1.5
LMO3-220ENST00000539232 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 PSMB11A5LHX3 300 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 B4DEV8 164 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 H0YJW9 148 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 ADAP1O75689 374 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 SCGNO76038 276 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 JTBO76095 146 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 IGKV1-16P04430 117 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 RPLP1P05386 114 aaKnown RBP5.66□□□□□ -1.5
LMO3-220ENST00000539232 OR5AC1P0C628 307 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 OR8U9P0C7N5 309 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 EGR2P11161 476 aaPredicted RBP5.66□□□□□ -1.5
LMO3-220ENST00000539232 IGLL1P15814 213 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 RAB6AP20340 208 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 ZBTB25P24278 435 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 SULT1A1P50225 295 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 SSBP2P81877 361 aaPredicted RBP5.66□□□□□ -1.5
LMO3-220ENST00000539232 TNFRSF9Q07011 255 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 DHRS2Q13268 280 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 JOSD1Q15040 202 aaPredicted RBP5.66□□□□□ -1.5
LMO3-220ENST00000539232 DEFB136Q30KP8 78 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 PRSS54Q6PEW0 395 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 DHRS11Q6UWP2 260 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 SLC35E3Q7Z769 313 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 NDUFA11Q86Y39 141 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 OR51S1Q8NGJ8 323 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 OR8U1Q8NH10 309 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 AKR1E2Q96JD6 320 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 SCGB3A2Q96PL1 93 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 GPHA2Q96T91 129 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 FBXL15Q9H469 300 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 CYTL1Q9NRR1 136 aa5.66□□□□□ -1.5
LMO3-220ENST00000539232 AURKAIP1Q9NWT8 199 aaPredicted RBP5.66□□□□□ -1.5
LMO3-220ENST00000539232 STRAPQ9Y3F4 350 aaKnown RBP5.66□□□□□ -1.5
LMO3-220ENST00000539232 IGHV7-81A0A0B4J1V7 117 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 IGKV1D-13A0A0B4J2D9 117 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 SMCO3A2RU48 225 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 SRRM4A7MD48 611 aaKnown RBP5.65□□□□□ -1.5
LMO3-220ENST00000539232 M0R143 59 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 SOX15O60248 233 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 OR2C1O95371 312 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 DUS4LO95620 317 aaKnown RBP5.65□□□□□ -1.5
LMO3-220ENST00000539232 LY86O95711 162 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 RAB3DO95716 219 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 IGKV1-13P0DP09 117 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 IL3RAP26951 378 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 AKR1C2P52895 323 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 KRTAP10-11P60412 298 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 RPL23AP62750 156 aaKnown RBP5.65□□□□□ -1.5
LMO3-220ENST00000539232 AKR1C1Q04828 323 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 MMDQ15546 238 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 MRGPRG-AS1Q2M3A8 158 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 TMEM30BQ3MIR4 351 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 ZNF260Q3ZCT1 412 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 C19orf54Q5BKX5 351 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 KHDC1LQ5JSQ8 128 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 C8orf86Q6ZUL3 223 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 MOB1BQ7L9L4 216 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 HIST3H2BBQ8N257 126 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 GVQW1Q8N7I0 195 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 WFDC9Q8NEX5 89 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 OR5AN1Q8NGI8 311 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 OR13C8Q8NGS7 320 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 RCC1LQ96I51 464 aaKnown RBP5.65□□□□□ -1.5
LMO3-220ENST00000539232 CABLES2Q9BTV7 478 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 ST6GALNAC5Q9BVH7 336 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 SLC35B3Q9H1N7 401 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 RIMS4Q9H426 269 aaPredicted RBP5.65□□□□□ -1.5
LMO3-220ENST00000539232 FAM212BQ9NTI7 297 aaPredicted RBP5.65□□□□□ -1.5
LMO3-220ENST00000539232 LIN7CQ9NUP9 197 aaKnown RBP5.65□□□□□ -1.5
LMO3-220ENST00000539232 TMEM242Q9NWH2 141 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 DOK5Q9P104 306 aa5.65□□□□□ -1.5
LMO3-220ENST00000539232 GOLT1BQ9Y3E0 138 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms