RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 GGTLC3B5MD39 225 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 ADH4P08319 380 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 IGFBP2P18065 325 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 NPY1RP25929 384 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 UBALD2Q8IYN6 164 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 NANOS1Q8WY41 292 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 WNT9BO14905 357 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 TBC1D28Q2M2D7 210 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 ALKBH2Q6NS38 261 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 TMEM140Q9NV12 185 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 KNTC1P50748 2209 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 PRRC2CQ9Y520 2896 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 SPINT2O43291 252 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 FAM214BQ7L5A3 538 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 PRR7Q8TB68 274 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 VPS25Q9BRG1 176 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 CST9LQ9H4G1 147 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 PLEKHA3Q9HB20 300 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 TNFRSF19Q9NS68 423 aa15.3■□□□□ 0.04
SFSWAP-207ENST00000538548 AHRRA9YTQ3 701 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 SMPD2O60906 423 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 TNFSF15O95150 251 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 CA1P00915 261 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 CCL4P13236 92 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 RTL8BQ17RB0 113 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 ALKBH6Q3KRA9 238 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 TPRX1Q8N7U7 411 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 ZNF503Q96F45 646 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 GCM1Q9NP62 436 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 CELA3AP09093 270 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 OCIAD2Q56VL3 154 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 LDLRAD2Q5SZI1 272 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 PPP1R32Q7Z5V6 425 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 NEUROG1Q92886 237 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 NABP2Q9BQ15 211 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 ST20Q9HBF5 79 aa15.29■□□□□ 0.04
SFSWAP-207ENST00000538548 A0A1W2PRE2 83 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 FNDC10F2Z333 226 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 OTX2P32243 289 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 MPV17L2Q567V2 206 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 RNASEKQ6P5S7 137 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 IFI44Q8TCB0 444 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 SAP25Q8TEE9 199 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 BCL2L2Q92843 193 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 TMEM70Q9BUB7 260 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 AHCTF1Q8WYP5 2266 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 C15orf65H3BRN8 121 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 M0R1X1 148 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 TAX1BP3O14907 124 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 LAMTOR5O43504 91 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 OR7C2O60412 319 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 MFAP2P55001 183 aa15.28■□□□□ 0.04
SFSWAP-207ENST00000538548 FAM186AA6NE01 2351 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 CBY3A6NI87 242 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 C15orf61A6NNL5 157 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 IQCF6A8MYZ5 107 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 TRAT1Q6PIZ9 186 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 ACP7Q6ZNF0 438 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 FAM216AQ8WUB2 273 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 FAM168AQ92567 244 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 FAM234AQ9H0X4 552 aa15.27■□□□□ 0.04
SFSWAP-207ENST00000538548 OR2J3O76001 311 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 TAS2R45P59539 299 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 MRPL49Q13405 166 aaKnown RBP15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 SPINK14Q6IE38 97 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 ZNF826PQ6ZT77 177 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 ZNF596Q8TC21 504 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 MBD6Q96DN6 1003 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 RNF24Q9Y225 148 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 LOXL2Q9Y4K0 774 aa15.27■□□□□ 0.03
SFSWAP-207ENST00000538548 RPL8P62917 257 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 LTC4SQ16873 150 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 GDF5OSQ5U4N7 250 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 PMS2CLQ68D20 193 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 SPATA12Q7Z6I5 190 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 CXorf67Q86X51 503 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 OR2V2Q96R30 315 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 S1PR3Q99500 378 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 SSBP3Q9BWW4 388 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 B4GALT7Q9UBV7 327 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 CRXO43186 299 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 TFF1P04155 84 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 FAM231DQ6ZW35 169 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 C11orf53Q8IXP5 236 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 TRIB1Q96RU8 372 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 WASHC3Q9Y3C0 194 aa15.26■□□□□ 0.03
SFSWAP-207ENST00000538548 OR4C46A6NHA9 309 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 HOXA4Q00056 320 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 DEFB125Q8N687 156 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 SLC25A40Q8TBP6 338 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 FAM173AQ9BQD7 235 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 C19orf24Q9BVV8 132 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 ENY2Q9NPA8 101 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 OBP2BQ9NPH6 170 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 C1RLQ9NZP8 487 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 GNG12Q9UBI6 72 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 PILRBQ9UKJ0 227 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 KIR2DS2P43631 304 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 KIR3DL3Q8N743 410 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms