RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SLURP1P55000 103 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 FAM74A1Q5RGS3 127 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 GINS3Q9BRX5 216 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 AKIP1Q9NQ31 210 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 BORCS7-ASMTA0A0B4J1R7 106 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 A0A0G2JRQ6 117 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 MED6O75586 246 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 PET100P0DJ07 73 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 LMO1P25800 156 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 FGF8P55075 233 aaPredicted RBP5.77□□□□□ -1.49
MSH6-209ENST00000538136 UBA52P62987 128 aaKnown RBP5.77□□□□□ -1.49
MSH6-209ENST00000538136 HBG1P69891 147 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 HBG2P69892 147 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 SRPXP78539 464 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 TMEM182Q6ZP80 229 aaPredicted RBP5.77□□□□□ -1.49
MSH6-209ENST00000538136 LURAP1LQ8IV03 231 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 GHITMQ9H3K2 345 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 ESM1Q9NQ30 184 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 C21orf62Q9NYP8 219 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 ICMTO60725 284 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 FCN3O75636 299 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 ALX3O95076 343 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 SPP1P10451 314 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 CAMLGP49069 296 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 RPL15P61313 204 aaKnown RBP5.77□□□□□ -1.49
MSH6-209ENST00000538136 FAM106AQ4KMX7 169 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 MINOS1Q5TGZ0 78 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 DUSP18Q8NEJ0 188 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 LHFPL5Q8TAF8 219 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 PTX4Q96A99 478 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 HRH4Q9H3N8 390 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 RBKSQ9H477 322 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 MINOS1-NBL1R4GNA1 71 aa5.77□□□□□ -1.49
MSH6-209ENST00000538136 MFSD2BA6NFX1 497 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 SEC14L6B5MCN3 397 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 TBPP20226 339 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 RPL12P30050 165 aaKnown RBP5.76□□□□□ -1.49
MSH6-209ENST00000538136 FOXL1Q12952 345 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 MIDNQ504T8 468 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 PRR27Q6MZM9 219 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 ZNF66Q6ZN08 573 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 Q6ZSV7 163 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 ZNF554Q86TJ5 538 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 PDPNQ86YL7 162 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 Q8WTZ3 238 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 SFT2D1Q8WV19 159 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 TMED6Q8WW62 240 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 TMEM222Q9H0R3 208 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 RD3LP0DJH9 198 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 C4BPBP20851 252 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 PSMB6P28072 239 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 PRSS8Q16651 343 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 FAM78BQ5VT40 261 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 Q6ZRM9 215 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 ELOVL1Q9BW60 279 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 LDLRAD4O15165 306 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 ZNF688P0C7X2 276 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 COMPP49747 757 aaPredicted RBP5.76□□□□□ -1.49
MSH6-209ENST00000538136 C2orf68Q2NKX9 166 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 KRTAP27-1Q3LI81 207 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 ZNF529Q6P280 563 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 BTNL8Q6UX41 500 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 SSX7Q7RTT5 188 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 SELENOHQ8IZQ5 122 aaKnown RBP5.76□□□□□ -1.49
MSH6-209ENST00000538136 OR1S2Q8NGQ3 325 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 OSR1Q8TAX0 266 aaPredicted RBP5.76□□□□□ -1.49
MSH6-209ENST00000538136 RSG1Q9BU20 258 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 TMEM147Q9BVK8 224 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 FKBP11Q9NYL4 201 aa5.76□□□□□ -1.49
MSH6-209ENST00000538136 CYCSP99999 105 aaKnown RBP5.75□□□□□ -1.49
MSH6-209ENST00000538136 DHODHQ02127 395 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 MIC13Q5XKP0 118 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 CMTM2Q8TAZ6 248 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 EIF5A2Q9GZV4 153 aaKnown RBP5.75□□□□□ -1.49
MSH6-209ENST00000538136 SERTAD4Q9NUC0 356 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 OPN4Q9UHM6 478 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 HCFC1P51610 2035 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 C7orf66A4D0T2 115 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 NDUFB8O95169 186 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 IER3P46695 156 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 RANP62826 216 aaKnown RBP5.75□□□□□ -1.49
MSH6-209ENST00000538136 TIGITQ495A1 244 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 LINC01006Q8NI28 216 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 LSM10Q969L4 123 aaKnown RBP5.75□□□□□ -1.49
MSH6-209ENST00000538136 C2orf50Q96LR7 162 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 RTBDNQ9BSG5 229 aaPredicted RBP5.75□□□□□ -1.49
MSH6-209ENST00000538136 AURKAIP1Q9NWT8 199 aaPredicted RBP5.75□□□□□ -1.49
MSH6-209ENST00000538136 COL27A1Q8IZC6 1860 aaPredicted RBP5.75□□□□□ -1.49
MSH6-209ENST00000538136 DYNLT3P51808 116 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 TM4SF20Q53R12 229 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 Q5BKY6 102 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 VAX1Q5SQQ9 334 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 STPG2Q8N412 459 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 OR2G3Q8NGZ4 309 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 UBE2E2Q96LR5 201 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 MDFIQ99750 246 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 SLC25A31Q9H0C2 315 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 SLC39A9Q9NUM3 307 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 UQCC1Q9NVA1 299 aa5.75□□□□□ -1.49
MSH6-209ENST00000538136 TMED3Q9Y3Q3 217 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms